Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 AC008894.3-201ENST00000624324 3103 ntBASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 AC242376.1-201ENST00000559033 726 ntBASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 SNX1-214ENST00000625244 324 ntTSL 5 BASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.09■□□□□ 0.33
HOXC10Q9NYD6 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
HOXC10Q9NYD6 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HOXC10Q9NYD6 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
HOXC10Q9NYD6 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
HOXC10Q9NYD6 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HOXC10Q9NYD6 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
HOXC10Q9NYD6 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HOXC10Q9NYD6 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
HOXC10Q9NYD6 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.08■□□□□ 0.33
HOXC10Q9NYD6 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HOXC10Q9NYD6 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HOXC10Q9NYD6 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.08■□□□□ 0.33
HOXC10Q9NYD6 AC144522.1-201ENST00000625111 1658 ntBASIC17.08■□□□□ 0.32
HOXC10Q9NYD6 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC10Q9NYD6 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC10Q9NYD6 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC17.08■□□□□ 0.32
HOXC10Q9NYD6 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC10Q9NYD6 UFM1-202ENST00000379649 846 ntTSL 4 BASIC17.08■□□□□ 0.32
HOXC10Q9NYD6 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
HOXC10Q9NYD6 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC10Q9NYD6 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC17.08■□□□□ 0.32
HOXC10Q9NYD6 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.08■□□□□ 0.32
HOXC10Q9NYD6 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC17.08■□□□□ 0.32
HOXC10Q9NYD6 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC10Q9NYD6 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
HOXC10Q9NYD6 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
HOXC10Q9NYD6 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC17.08■□□□□ 0.32
HOXC10Q9NYD6 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
HOXC10Q9NYD6 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC17.08■□□□□ 0.32
HOXC10Q9NYD6 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
HOXC10Q9NYD6 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC10Q9NYD6 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC10Q9NYD6 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
HOXC10Q9NYD6 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
HOXC10Q9NYD6 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC10Q9NYD6 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC10Q9NYD6 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC10Q9NYD6 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC10Q9NYD6 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC10Q9NYD6 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC10Q9NYD6 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC10Q9NYD6 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms