Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 AC055811.4-201ENST00000624039 1754 ntBASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
COMMD4Q9H0A8 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
COMMD4Q9H0A8 AP001267.2-201ENST00000532619 2086 ntBASIC13.4□□□□□ -0.27
COMMD4Q9H0A8 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 AC005840.4-201ENST00000541242 2494 ntBASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 AC041040.2-201ENST00000622926 2899 ntBASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 MIR193BHG-211ENST00000641433 5365 ntBASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 TPT1P11-201ENST00000458482 498 ntBASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 AC004835.2-201ENST00000603762 682 ntBASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 AF228730.6-201ENST00000641497 218 ntBASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 AC084121.3-201ENST00000641716 218 ntBASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
COMMD4Q9H0A8 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
COMMD4Q9H0A8 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
COMMD4Q9H0A8 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
COMMD4Q9H0A8 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
COMMD4Q9H0A8 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
COMMD4Q9H0A8 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
COMMD4Q9H0A8 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
COMMD4Q9H0A8 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
COMMD4Q9H0A8 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
COMMD4Q9H0A8 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
COMMD4Q9H0A8 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
COMMD4Q9H0A8 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
COMMD4Q9H0A8 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.38□□□□□ -0.27
COMMD4Q9H0A8 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
COMMD4Q9H0A8 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms