Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 KRT8P31-201ENST00000504812 1408 ntBASIC19.24■□□□□ 0.67
PCDH11XQ9BZA7 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PCDH11XQ9BZA7 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PCDH11XQ9BZA7 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PCDH11XQ9BZA7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH11XQ9BZA7 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDH11XQ9BZA7 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH11XQ9BZA7 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDH11XQ9BZA7 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PCDH11XQ9BZA7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH11XQ9BZA7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PCDH11XQ9BZA7 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH11XQ9BZA7 KRT8P28-201ENST00000433288 1390 ntBASIC19.24■□□□□ 0.67
PCDH11XQ9BZA7 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDH11XQ9BZA7 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDH11XQ9BZA7 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH11XQ9BZA7 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH11XQ9BZA7 BANF1P3-201ENST00000412556 261 ntBASIC19.24■□□□□ 0.67
PCDH11XQ9BZA7 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH11XQ9BZA7 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDH11XQ9BZA7 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH11XQ9BZA7 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
PCDH11XQ9BZA7 MIR4522-201ENST00000584932 87 ntBASIC19.24■□□□□ 0.67
PCDH11XQ9BZA7 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC19.24■□□□□ 0.67
PCDH11XQ9BZA7 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PCDH11XQ9BZA7 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDH11XQ9BZA7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH11XQ9BZA7 PCDHA1-201ENST00000378133 2726 ntBASIC19.23■□□□□ 0.67
PCDH11XQ9BZA7 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PCDH11XQ9BZA7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH11XQ9BZA7 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDH11XQ9BZA7 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PCDH11XQ9BZA7 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH11XQ9BZA7 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
PCDH11XQ9BZA7 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH11XQ9BZA7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH11XQ9BZA7 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH11XQ9BZA7 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH11XQ9BZA7 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDH11XQ9BZA7 AC084018.2-201ENST00000613093 2607 ntBASIC19.23■□□□□ 0.67
PCDH11XQ9BZA7 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PCDH11XQ9BZA7 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH11XQ9BZA7 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH11XQ9BZA7 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH11XQ9BZA7 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH11XQ9BZA7 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH11XQ9BZA7 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC19.23■□□□□ 0.67
PCDH11XQ9BZA7 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH11XQ9BZA7 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH11XQ9BZA7 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDH11XQ9BZA7 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDH11XQ9BZA7 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC19.23■□□□□ 0.67
PCDH11XQ9BZA7 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH11XQ9BZA7 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDH11XQ9BZA7 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDH11XQ9BZA7 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDH11XQ9BZA7 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH11XQ9BZA7 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH11XQ9BZA7 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH11XQ9BZA7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH11XQ9BZA7 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH11XQ9BZA7 F10-203ENST00000409306 1450 ntTSL 3 BASIC19.22■□□□□ 0.67
PCDH11XQ9BZA7 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDH11XQ9BZA7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH11XQ9BZA7 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH11XQ9BZA7 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH11XQ9BZA7 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH11XQ9BZA7 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDH11XQ9BZA7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDH11XQ9BZA7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDH11XQ9BZA7 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDH11XQ9BZA7 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH11XQ9BZA7 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH11XQ9BZA7 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH11XQ9BZA7 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH11XQ9BZA7 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC19.22■□□□□ 0.67
PCDH11XQ9BZA7 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC19.22■□□□□ 0.67
PCDH11XQ9BZA7 AL627422.1-201ENST00000434104 580 ntBASIC19.22■□□□□ 0.67
PCDH11XQ9BZA7 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC19.22■□□□□ 0.67
PCDH11XQ9BZA7 RPL18AP3-201ENST00000462885 528 ntBASIC19.22■□□□□ 0.67
PCDH11XQ9BZA7 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PCDH11XQ9BZA7 AC003686.1-201ENST00000550956 1034 ntBASIC19.22■□□□□ 0.67
PCDH11XQ9BZA7 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC19.22■□□□□ 0.67
PCDH11XQ9BZA7 GMFG-209ENST00000600322 622 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDH11XQ9BZA7 SIGLEC18P-201ENST00000602271 909 ntBASIC19.22■□□□□ 0.67
PCDH11XQ9BZA7 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH11XQ9BZA7 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH11XQ9BZA7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
PCDH11XQ9BZA7 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDH11XQ9BZA7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDH11XQ9BZA7 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH11XQ9BZA7 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDH11XQ9BZA7 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH11XQ9BZA7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDH11XQ9BZA7 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PCDH11XQ9BZA7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH11XQ9BZA7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH11XQ9BZA7 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH11XQ9BZA7 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH11XQ9BZA7 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms