Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK1Q99986 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK1Q99986 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.44□□□□□ -0.26
VRK1Q99986 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VRK1Q99986 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.44□□□□□ -0.26
VRK1Q99986 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
VRK1Q99986 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK1Q99986 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK1Q99986 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.44□□□□□ -0.26
VRK1Q99986 RN7SL837P-201ENST00000463010 287 ntBASIC13.44□□□□□ -0.26
VRK1Q99986 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.44□□□□□ -0.26
VRK1Q99986 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.44□□□□□ -0.26
VRK1Q99986 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.44□□□□□ -0.26
VRK1Q99986 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.44□□□□□ -0.26
VRK1Q99986 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.44□□□□□ -0.26
VRK1Q99986 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
VRK1Q99986 MIR8072-201ENST00000614241 80 ntBASIC13.44□□□□□ -0.26
VRK1Q99986 AL033527.5-201ENST00000641382 801 ntBASIC13.44□□□□□ -0.26
VRK1Q99986 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
VRK1Q99986 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK1Q99986 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK1Q99986 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VRK1Q99986 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK1Q99986 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
VRK1Q99986 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
VRK1Q99986 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK1Q99986 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK1Q99986 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VRK1Q99986 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK1Q99986 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK1Q99986 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK1Q99986 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VRK1Q99986 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.44□□□□□ -0.26
VRK1Q99986 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK1Q99986 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VRK1Q99986 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.44□□□□□ -0.26
VRK1Q99986 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK1Q99986 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK1Q99986 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VRK1Q99986 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK1Q99986 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.43□□□□□ -0.26
VRK1Q99986 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VRK1Q99986 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VRK1Q99986 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
VRK1Q99986 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
VRK1Q99986 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
VRK1Q99986 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.43□□□□□ -0.26
VRK1Q99986 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VRK1Q99986 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VRK1Q99986 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VRK1Q99986 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VRK1Q99986 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VRK1Q99986 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VRK1Q99986 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VRK1Q99986 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VRK1Q99986 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.43□□□□□ -0.26
VRK1Q99986 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.43□□□□□ -0.26
VRK1Q99986 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.43□□□□□ -0.26
VRK1Q99986 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.43□□□□□ -0.26
VRK1Q99986 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.43□□□□□ -0.26
VRK1Q99986 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.43□□□□□ -0.26
VRK1Q99986 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
VRK1Q99986 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.43□□□□□ -0.26
VRK1Q99986 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
VRK1Q99986 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.43□□□□□ -0.26
VRK1Q99986 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.43□□□□□ -0.26
VRK1Q99986 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VRK1Q99986 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.43□□□□□ -0.26
VRK1Q99986 TMEM261P1-201ENST00000604899 340 ntBASIC13.43□□□□□ -0.26
VRK1Q99986 WFDC1-204ENST00000613603 549 ntBASIC13.43□□□□□ -0.26
VRK1Q99986 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.43□□□□□ -0.26
VRK1Q99986 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
VRK1Q99986 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.43□□□□□ -0.26
VRK1Q99986 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VRK1Q99986 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VRK1Q99986 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VRK1Q99986 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
VRK1Q99986 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VRK1Q99986 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.43□□□□□ -0.26
VRK1Q99986 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.43□□□□□ -0.26
VRK1Q99986 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.43□□□□□ -0.26
VRK1Q99986 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VRK1Q99986 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VRK1Q99986 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.43□□□□□ -0.26
VRK1Q99986 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VRK1Q99986 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VRK1Q99986 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
VRK1Q99986 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
VRK1Q99986 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VRK1Q99986 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VRK1Q99986 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VRK1Q99986 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
VRK1Q99986 AC018892.3-201ENST00000623986 2499 ntBASIC13.42□□□□□ -0.26
VRK1Q99986 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.42□□□□□ -0.26
VRK1Q99986 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VRK1Q99986 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.42□□□□□ -0.26
VRK1Q99986 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VRK1Q99986 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
VRK1Q99986 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VRK1Q99986 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms