Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.32■□□□□ 0.04
SEMA3CQ99985 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SEMA3CQ99985 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEMA3CQ99985 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEMA3CQ99985 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SEMA3CQ99985 CICP23-201ENST00000605013 2741 ntBASIC15.31■□□□□ 0.04
SEMA3CQ99985 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEMA3CQ99985 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SEMA3CQ99985 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEMA3CQ99985 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEMA3CQ99985 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEMA3CQ99985 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEMA3CQ99985 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.31■□□□□ 0.04
SEMA3CQ99985 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.31■□□□□ 0.04
SEMA3CQ99985 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEMA3CQ99985 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SEMA3CQ99985 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEMA3CQ99985 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEMA3CQ99985 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.31■□□□□ 0.04
SEMA3CQ99985 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.31■□□□□ 0.04
SEMA3CQ99985 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SEMA3CQ99985 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEMA3CQ99985 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.31■□□□□ 0.04
SEMA3CQ99985 KRT17P8-201ENST00000540749 863 ntBASIC15.31■□□□□ 0.04
SEMA3CQ99985 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.31■□□□□ 0.04
SEMA3CQ99985 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.31■□□□□ 0.04
SEMA3CQ99985 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEMA3CQ99985 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.31■□□□□ 0.04
SEMA3CQ99985 AC004466.1-201ENST00000599515 1080 ntBASIC15.31■□□□□ 0.04
SEMA3CQ99985 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.31■□□□□ 0.04
SEMA3CQ99985 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
SEMA3CQ99985 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SEMA3CQ99985 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.31■□□□□ 0.04
SEMA3CQ99985 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEMA3CQ99985 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.31■□□□□ 0.04
SEMA3CQ99985 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEMA3CQ99985 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SEMA3CQ99985 MIR600HG-201ENST00000449175 5984 ntBASIC15.31■□□□□ 0.04
SEMA3CQ99985 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
SEMA3CQ99985 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEMA3CQ99985 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEMA3CQ99985 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SEMA3CQ99985 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SEMA3CQ99985 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SEMA3CQ99985 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
SEMA3CQ99985 LINC01101-201ENST00000622953 1884 ntBASIC15.31■□□□□ 0.04
SEMA3CQ99985 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SEMA3CQ99985 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEMA3CQ99985 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SEMA3CQ99985 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.31■□□□□ 0.04
SEMA3CQ99985 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.3■□□□□ 0.04
SEMA3CQ99985 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.3■□□□□ 0.04
SEMA3CQ99985 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEMA3CQ99985 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
SEMA3CQ99985 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEMA3CQ99985 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SEMA3CQ99985 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SEMA3CQ99985 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SEMA3CQ99985 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEMA3CQ99985 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEMA3CQ99985 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEMA3CQ99985 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.3■□□□□ 0.04
SEMA3CQ99985 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SEMA3CQ99985 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.3■□□□□ 0.04
SEMA3CQ99985 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.3■□□□□ 0.04
SEMA3CQ99985 MIR658-201ENST00000385210 100 ntBASIC15.3■□□□□ 0.04
SEMA3CQ99985 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEMA3CQ99985 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.3■□□□□ 0.04
SEMA3CQ99985 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.3■□□□□ 0.04
SEMA3CQ99985 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SEMA3CQ99985 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.3■□□□□ 0.04
SEMA3CQ99985 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.3■□□□□ 0.04
SEMA3CQ99985 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.3■□□□□ 0.04
SEMA3CQ99985 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.3■□□□□ 0.04
SEMA3CQ99985 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SEMA3CQ99985 FO681548.1-201ENST00000455617 1132 ntBASIC15.3■□□□□ 0.04
SEMA3CQ99985 FTH1P14-201ENST00000482930 551 ntBASIC15.3■□□□□ 0.04
SEMA3CQ99985 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.3■□□□□ 0.04
SEMA3CQ99985 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.3■□□□□ 0.04
SEMA3CQ99985 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.3■□□□□ 0.04
SEMA3CQ99985 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.3■□□□□ 0.04
SEMA3CQ99985 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.3■□□□□ 0.04
SEMA3CQ99985 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.3■□□□□ 0.04
SEMA3CQ99985 AC025279.2-201ENST00000569730 653 ntBASIC15.3■□□□□ 0.04
SEMA3CQ99985 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.3■□□□□ 0.04
SEMA3CQ99985 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SEMA3CQ99985 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.3■□□□□ 0.04
SEMA3CQ99985 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.3■□□□□ 0.04
SEMA3CQ99985 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.3■□□□□ 0.04
SEMA3CQ99985 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.3■□□□□ 0.04
SEMA3CQ99985 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
SEMA3CQ99985 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SEMA3CQ99985 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SEMA3CQ99985 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEMA3CQ99985 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEMA3CQ99985 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEMA3CQ99985 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.3■□□□□ 0.04
SEMA3CQ99985 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.3■□□□□ 0.04
SEMA3CQ99985 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEMA3CQ99985 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms