Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
TM9SF2Q99805 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF2Q99805 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF2Q99805 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.11□□□□□ -0.15
TM9SF2Q99805 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF2Q99805 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF2Q99805 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF2Q99805 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF2Q99805 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TM9SF2Q99805 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 AC140479.7-201ENST00000636301 2332 ntBASIC14.1□□□□□ -0.15
TM9SF2Q99805 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
TM9SF2Q99805 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TM9SF2Q99805 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.1□□□□□ -0.15
TM9SF2Q99805 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.1□□□□□ -0.15
TM9SF2Q99805 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.1□□□□□ -0.15
TM9SF2Q99805 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.1□□□□□ -0.15
TM9SF2Q99805 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TM9SF2Q99805 AL512384.1-201ENST00000406683 331 ntBASIC14.1□□□□□ -0.15
TM9SF2Q99805 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.1□□□□□ -0.15
TM9SF2Q99805 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.1□□□□□ -0.15
TM9SF2Q99805 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.1□□□□□ -0.15
TM9SF2Q99805 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.1□□□□□ -0.15
TM9SF2Q99805 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.1□□□□□ -0.15
TM9SF2Q99805 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TM9SF2Q99805 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TM9SF2Q99805 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.1□□□□□ -0.15
TM9SF2Q99805 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TM9SF2Q99805 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TM9SF2Q99805 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF2Q99805 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.1□□□□□ -0.15
TM9SF2Q99805 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF2Q99805 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF2Q99805 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.09□□□□□ -0.15
TM9SF2Q99805 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.09□□□□□ -0.15
TM9SF2Q99805 LINC01230-201ENST00000625222 3017 ntBASIC14.09□□□□□ -0.15
TM9SF2Q99805 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF2Q99805 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.09□□□□□ -0.15
TM9SF2Q99805 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF2Q99805 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.09□□□□□ -0.15
TM9SF2Q99805 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF2Q99805 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
TM9SF2Q99805 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF2Q99805 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF2Q99805 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF2Q99805 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF2Q99805 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF2Q99805 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF2Q99805 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF2Q99805 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF2Q99805 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.09□□□□□ -0.15
TM9SF2Q99805 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF2Q99805 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TM9SF2Q99805 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF2Q99805 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF2Q99805 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.09□□□□□ -0.15
TM9SF2Q99805 INE1-201ENST00000456273 945 ntBASIC14.09□□□□□ -0.15
TM9SF2Q99805 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.09□□□□□ -0.15
TM9SF2Q99805 RN7SL399P-201ENST00000471648 279 ntBASIC14.09□□□□□ -0.15
TM9SF2Q99805 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF2Q99805 SLED1-202ENST00000512051 380 ntBASIC14.09□□□□□ -0.15
TM9SF2Q99805 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.09□□□□□ -0.15
TM9SF2Q99805 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms