Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.85□□□□□ -0.03
NPAS2Q99743 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.85□□□□□ -0.03
NPAS2Q99743 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
NPAS2Q99743 PIN1P1-201ENST00000412108 996 ntBASIC14.85□□□□□ -0.03
NPAS2Q99743 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.85□□□□□ -0.03
NPAS2Q99743 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.85□□□□□ -0.03
NPAS2Q99743 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.85□□□□□ -0.03
NPAS2Q99743 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.85□□□□□ -0.03
NPAS2Q99743 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.85□□□□□ -0.03
NPAS2Q99743 GNAQP1-201ENST00000444815 1067 ntBASIC14.85□□□□□ -0.03
NPAS2Q99743 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS2Q99743 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS2Q99743 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
NPAS2Q99743 AC104794.3-201ENST00000566840 1248 ntBASIC14.85□□□□□ -0.03
NPAS2Q99743 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.85□□□□□ -0.03
NPAS2Q99743 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
NPAS2Q99743 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.85□□□□□ -0.03
NPAS2Q99743 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS2Q99743 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS2Q99743 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.85□□□□□ -0.03
NPAS2Q99743 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.85□□□□□ -0.03
NPAS2Q99743 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.85□□□□□ -0.03
NPAS2Q99743 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.85□□□□□ -0.03
NPAS2Q99743 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS2Q99743 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS2Q99743 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.85□□□□□ -0.03
NPAS2Q99743 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
NPAS2Q99743 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NPAS2Q99743 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.85□□□□□ -0.03
NPAS2Q99743 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS2Q99743 AC018442.1-201ENST00000421439 2061 ntBASIC14.85□□□□□ -0.03
NPAS2Q99743 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPAS2Q99743 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.84□□□□□ -0.03
NPAS2Q99743 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.84□□□□□ -0.03
NPAS2Q99743 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.84□□□□□ -0.03
NPAS2Q99743 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPAS2Q99743 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NPAS2Q99743 BTBD7P1-201ENST00000447253 1453 ntBASIC14.84□□□□□ -0.03
NPAS2Q99743 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPAS2Q99743 PTENP1-202ENST00000532280 3996 ntBASIC14.84□□□□□ -0.03
NPAS2Q99743 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPAS2Q99743 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPAS2Q99743 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.84□□□□□ -0.03
NPAS2Q99743 AC114501.2-201ENST00000439631 535 ntBASIC14.84□□□□□ -0.03
NPAS2Q99743 SERBP1P3-201ENST00000459980 809 ntBASIC14.84□□□□□ -0.03
NPAS2Q99743 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.84□□□□□ -0.03
NPAS2Q99743 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.84□□□□□ -0.03
NPAS2Q99743 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.84□□□□□ -0.03
NPAS2Q99743 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.84□□□□□ -0.03
NPAS2Q99743 AC004233.3-201ENST00000607794 1269 ntBASIC14.84□□□□□ -0.03
NPAS2Q99743 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.84□□□□□ -0.03
NPAS2Q99743 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.84□□□□□ -0.03
NPAS2Q99743 AL662799.1-202ENST00000614205 422 ntBASIC14.84□□□□□ -0.03
NPAS2Q99743 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.84□□□□□ -0.03
NPAS2Q99743 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
NPAS2Q99743 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPAS2Q99743 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPAS2Q99743 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
NPAS2Q99743 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
NPAS2Q99743 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPAS2Q99743 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
NPAS2Q99743 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPAS2Q99743 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPAS2Q99743 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPAS2Q99743 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPAS2Q99743 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPAS2Q99743 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPAS2Q99743 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
NPAS2Q99743 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
NPAS2Q99743 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPAS2Q99743 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPAS2Q99743 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
NPAS2Q99743 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NPAS2Q99743 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
NPAS2Q99743 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NPAS2Q99743 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
NPAS2Q99743 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
NPAS2Q99743 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
NPAS2Q99743 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NPAS2Q99743 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
NPAS2Q99743 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
NPAS2Q99743 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPAS2Q99743 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPAS2Q99743 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
NPAS2Q99743 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NPAS2Q99743 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPAS2Q99743 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPAS2Q99743 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPAS2Q99743 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.83□□□□□ -0.04
NPAS2Q99743 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.83□□□□□ -0.04
NPAS2Q99743 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.83□□□□□ -0.04
NPAS2Q99743 AL109936.8-201ENST00000641772 604 ntBASIC14.83□□□□□ -0.04
NPAS2Q99743 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NPAS2Q99743 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPAS2Q99743 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPAS2Q99743 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPAS2Q99743 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NPAS2Q99743 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPAS2Q99743 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.83□□□□□ -0.04
NPAS2Q99743 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms