Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SNX18Q96RF0 KRT18P43-201ENST00000469825 1281 ntBASIC13.85□□□□□ -0.19
SNX18Q96RF0 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNX18Q96RF0 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.85□□□□□ -0.19
SNX18Q96RF0 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.85□□□□□ -0.19
SNX18Q96RF0 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SNX18Q96RF0 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.85□□□□□ -0.19
SNX18Q96RF0 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.85□□□□□ -0.19
SNX18Q96RF0 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNX18Q96RF0 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.85□□□□□ -0.19
SNX18Q96RF0 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNX18Q96RF0 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.85□□□□□ -0.19
SNX18Q96RF0 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNX18Q96RF0 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SNX18Q96RF0 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNX18Q96RF0 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SNX18Q96RF0 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SNX18Q96RF0 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNX18Q96RF0 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SNX18Q96RF0 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.85□□□□□ -0.19
SNX18Q96RF0 Z82170.1-201ENST00000625081 3192 ntBASIC13.85□□□□□ -0.19
SNX18Q96RF0 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SNX18Q96RF0 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNX18Q96RF0 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.85□□□□□ -0.19
SNX18Q96RF0 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNX18Q96RF0 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNX18Q96RF0 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SNX18Q96RF0 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.84□□□□□ -0.19
SNX18Q96RF0 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SNX18Q96RF0 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.84□□□□□ -0.19
SNX18Q96RF0 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNX18Q96RF0 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNX18Q96RF0 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SNX18Q96RF0 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.84□□□□□ -0.19
SNX18Q96RF0 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SNX18Q96RF0 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SNX18Q96RF0 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.84□□□□□ -0.19
SNX18Q96RF0 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.84□□□□□ -0.19
SNX18Q96RF0 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.84□□□□□ -0.19
SNX18Q96RF0 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.84□□□□□ -0.19
SNX18Q96RF0 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNX18Q96RF0 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
SNX18Q96RF0 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SNX18Q96RF0 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNX18Q96RF0 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNX18Q96RF0 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.84□□□□□ -0.19
SNX18Q96RF0 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SNX18Q96RF0 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SNX18Q96RF0 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SNX18Q96RF0 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SNX18Q96RF0 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SNX18Q96RF0 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.84□□□□□ -0.19
SNX18Q96RF0 ZNF890P-202ENST00000530367 1156 ntBASIC13.84□□□□□ -0.19
SNX18Q96RF0 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.84□□□□□ -0.19
SNX18Q96RF0 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.84□□□□□ -0.19
SNX18Q96RF0 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SNX18Q96RF0 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.84□□□□□ -0.19
SNX18Q96RF0 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.84□□□□□ -0.19
SNX18Q96RF0 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.84□□□□□ -0.19
SNX18Q96RF0 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNX18Q96RF0 AC138969.3-201ENST00000546612 1459 ntBASIC13.84□□□□□ -0.19
SNX18Q96RF0 AC138932.2-201ENST00000548268 1459 ntBASIC13.84□□□□□ -0.19
SNX18Q96RF0 AC126755.4-201ENST00000549796 1459 ntBASIC13.84□□□□□ -0.19
SNX18Q96RF0 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNX18Q96RF0 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNX18Q96RF0 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.84□□□□□ -0.19
SNX18Q96RF0 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SNX18Q96RF0 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNX18Q96RF0 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SNX18Q96RF0 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNX18Q96RF0 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.84□□□□□ -0.19
SNX18Q96RF0 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.84□□□□□ -0.19
SNX18Q96RF0 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNX18Q96RF0 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNX18Q96RF0 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SNX18Q96RF0 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNX18Q96RF0 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SNX18Q96RF0 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
SNX18Q96RF0 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SNX18Q96RF0 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SNX18Q96RF0 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
SNX18Q96RF0 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.83□□□□□ -0.19
SNX18Q96RF0 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SNX18Q96RF0 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.83□□□□□ -0.19
SNX18Q96RF0 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SNX18Q96RF0 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SNX18Q96RF0 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.83□□□□□ -0.19
SNX18Q96RF0 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SNX18Q96RF0 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.83□□□□□ -0.19
SNX18Q96RF0 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SNX18Q96RF0 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.83□□□□□ -0.19
SNX18Q96RF0 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SNX18Q96RF0 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.83□□□□□ -0.19
SNX18Q96RF0 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SNX18Q96RF0 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
SNX18Q96RF0 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNX18Q96RF0 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
SNX18Q96RF0 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNX18Q96RF0 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
SNX18Q96RF0 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms