Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
USP6NLQ92738 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP6NLQ92738 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.96■□□□□ 0.31
USP6NLQ92738 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC16.96■□□□□ 0.31
USP6NLQ92738 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.96■□□□□ 0.31
USP6NLQ92738 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
USP6NLQ92738 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.96■□□□□ 0.31
USP6NLQ92738 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.96■□□□□ 0.31
USP6NLQ92738 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.96■□□□□ 0.31
USP6NLQ92738 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.96■□□□□ 0.31
USP6NLQ92738 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
USP6NLQ92738 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
USP6NLQ92738 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
USP6NLQ92738 AC005962.1-201ENST00000584100 773 ntBASIC16.96■□□□□ 0.31
USP6NLQ92738 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.96■□□□□ 0.31
USP6NLQ92738 AC103810.10-201ENST00000606504 343 ntBASIC16.96■□□□□ 0.31
USP6NLQ92738 MEG3_2.1-201ENST00000611456 105 ntBASIC16.96■□□□□ 0.31
USP6NLQ92738 HLA-C-210ENST00000640219 976 ntBASIC16.96■□□□□ 0.31
USP6NLQ92738 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
USP6NLQ92738 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP6NLQ92738 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP6NLQ92738 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.96■□□□□ 0.31
USP6NLQ92738 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP6NLQ92738 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
USP6NLQ92738 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
USP6NLQ92738 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
USP6NLQ92738 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
USP6NLQ92738 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
USP6NLQ92738 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
USP6NLQ92738 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.96■□□□□ 0.3
USP6NLQ92738 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
USP6NLQ92738 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
USP6NLQ92738 REXO1L4P-201ENST00000605109 1937 ntBASIC16.96■□□□□ 0.3
USP6NLQ92738 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
USP6NLQ92738 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.96■□□□□ 0.3
USP6NLQ92738 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.96■□□□□ 0.3
USP6NLQ92738 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP6NLQ92738 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
USP6NLQ92738 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.95■□□□□ 0.3
USP6NLQ92738 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.95■□□□□ 0.3
USP6NLQ92738 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
USP6NLQ92738 AC136759.1-202ENST00000530858 2194 ntBASIC16.95■□□□□ 0.3
USP6NLQ92738 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.95■□□□□ 0.3
USP6NLQ92738 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.95■□□□□ 0.3
USP6NLQ92738 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
USP6NLQ92738 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
USP6NLQ92738 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP6NLQ92738 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP6NLQ92738 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP6NLQ92738 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP6NLQ92738 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.95■□□□□ 0.3
USP6NLQ92738 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.95■□□□□ 0.3
USP6NLQ92738 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.95■□□□□ 0.3
USP6NLQ92738 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
USP6NLQ92738 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP6NLQ92738 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP6NLQ92738 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
USP6NLQ92738 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP6NLQ92738 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
USP6NLQ92738 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP6NLQ92738 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.95■□□□□ 0.3
USP6NLQ92738 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.95■□□□□ 0.3
USP6NLQ92738 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP6NLQ92738 WT1-AS_6.1-201ENST00000614919 121 ntBASIC16.95■□□□□ 0.3
USP6NLQ92738 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.95■□□□□ 0.3
USP6NLQ92738 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP6NLQ92738 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP6NLQ92738 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP6NLQ92738 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP6NLQ92738 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
USP6NLQ92738 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP6NLQ92738 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP6NLQ92738 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP6NLQ92738 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP6NLQ92738 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
USP6NLQ92738 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.95■□□□□ 0.3
USP6NLQ92738 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
USP6NLQ92738 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.95■□□□□ 0.3
USP6NLQ92738 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
USP6NLQ92738 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.95■□□□□ 0.3
USP6NLQ92738 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
USP6NLQ92738 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.94■□□□□ 0.3
USP6NLQ92738 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP6NLQ92738 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP6NLQ92738 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP6NLQ92738 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
USP6NLQ92738 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP6NLQ92738 KRT8P21-201ENST00000430398 1491 ntBASIC16.94■□□□□ 0.3
USP6NLQ92738 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP6NLQ92738 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP6NLQ92738 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP6NLQ92738 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP6NLQ92738 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP6NLQ92738 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP6NLQ92738 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
USP6NLQ92738 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.94■□□□□ 0.3
USP6NLQ92738 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC16.94■□□□□ 0.3
USP6NLQ92738 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.94■□□□□ 0.3
USP6NLQ92738 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
USP6NLQ92738 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms