Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
TRAF3IP1Q8TDR0 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAF3IP1Q8TDR0 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
TRAF3IP1Q8TDR0 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAF3IP1Q8TDR0 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAF3IP1Q8TDR0 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAF3IP1Q8TDR0 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAF3IP1Q8TDR0 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAF3IP1Q8TDR0 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAF3IP1Q8TDR0 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAF3IP1Q8TDR0 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 AC093525.8-201ENST00000624099 1342 ntBASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TRAF3IP1Q8TDR0 INTS4P2-202ENST00000614726 2019 ntBASIC15.78■□□□□ 0.12
TRAF3IP1Q8TDR0 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAF3IP1Q8TDR0 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRAF3IP1Q8TDR0 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TRAF3IP1Q8TDR0 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAF3IP1Q8TDR0 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAF3IP1Q8TDR0 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAF3IP1Q8TDR0 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.78■□□□□ 0.12
TRAF3IP1Q8TDR0 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAF3IP1Q8TDR0 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAF3IP1Q8TDR0 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.78■□□□□ 0.12
TRAF3IP1Q8TDR0 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAF3IP1Q8TDR0 AL645937.2-201ENST00000396808 931 ntBASIC15.78■□□□□ 0.12
TRAF3IP1Q8TDR0 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAF3IP1Q8TDR0 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.78■□□□□ 0.12
TRAF3IP1Q8TDR0 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAF3IP1Q8TDR0 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAF3IP1Q8TDR0 AC134915.1-201ENST00000426461 574 ntBASIC15.78■□□□□ 0.12
TRAF3IP1Q8TDR0 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAF3IP1Q8TDR0 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.78■□□□□ 0.12
TRAF3IP1Q8TDR0 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAF3IP1Q8TDR0 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAF3IP1Q8TDR0 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TRAF3IP1Q8TDR0 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAF3IP1Q8TDR0 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAF3IP1Q8TDR0 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAF3IP1Q8TDR0 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
TRAF3IP1Q8TDR0 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.78■□□□□ 0.12
TRAF3IP1Q8TDR0 AC018529.2-202ENST00000611482 3087 ntBASIC15.78■□□□□ 0.12
TRAF3IP1Q8TDR0 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAF3IP1Q8TDR0 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TRAF3IP1Q8TDR0 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAF3IP1Q8TDR0 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TRAF3IP1Q8TDR0 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAF3IP1Q8TDR0 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAF3IP1Q8TDR0 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAF3IP1Q8TDR0 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAF3IP1Q8TDR0 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 SLC7A15P-201ENST00000424028 1363 ntBASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms