Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 AC018665.1-201ENST00000622927 1362 ntBASIC14.15□□□□□ -0.14
NUP43Q8NFH3 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 KLF2P2-201ENST00000416807 1039 ntBASIC14.15□□□□□ -0.14
NUP43Q8NFH3 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 AC022616.1-201ENST00000518688 554 ntBASIC14.15□□□□□ -0.14
NUP43Q8NFH3 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 ENPP7P5-201ENST00000541031 1031 ntBASIC14.15□□□□□ -0.14
NUP43Q8NFH3 AC190387.1-201ENST00000551683 408 ntBASIC14.15□□□□□ -0.14
NUP43Q8NFH3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 AC067750.1-201ENST00000608826 6545 ntBASIC14.15□□□□□ -0.14
NUP43Q8NFH3 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.15
NUP43Q8NFH3 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
NUP43Q8NFH3 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 SBF1P1-201ENST00000444527 5631 ntBASIC14.14□□□□□ -0.15
NUP43Q8NFH3 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 AL162726.2-201ENST00000438986 1017 ntBASIC14.14□□□□□ -0.15
NUP43Q8NFH3 TERF1P3-201ENST00000505638 1227 ntBASIC14.14□□□□□ -0.15
NUP43Q8NFH3 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 DUX4L47-201ENST00000566374 394 ntBASIC14.14□□□□□ -0.15
NUP43Q8NFH3 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.14□□□□□ -0.15
NUP43Q8NFH3 WFDC1-204ENST00000613603 549 ntBASIC14.14□□□□□ -0.15
NUP43Q8NFH3 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 AP005019.2-201ENST00000615104 511 ntBASIC14.14□□□□□ -0.15
NUP43Q8NFH3 CU634019.7-201ENST00000624153 1185 ntBASIC14.14□□□□□ -0.15
NUP43Q8NFH3 AC005252.2-201ENST00000624630 1141 ntBASIC14.14□□□□□ -0.15
NUP43Q8NFH3 FP236241.2-201ENST00000624906 1185 ntBASIC14.14□□□□□ -0.15
NUP43Q8NFH3 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms