Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
XRN1Q8IZH2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
XRN1Q8IZH2 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC20.23■□□□□ 0.83
XRN1Q8IZH2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
XRN1Q8IZH2 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC20.23■□□□□ 0.83
XRN1Q8IZH2 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
XRN1Q8IZH2 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
XRN1Q8IZH2 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
XRN1Q8IZH2 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC20.23■□□□□ 0.83
XRN1Q8IZH2 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
XRN1Q8IZH2 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC20.22■□□□□ 0.83
XRN1Q8IZH2 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
XRN1Q8IZH2 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC20.22■□□□□ 0.83
XRN1Q8IZH2 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
XRN1Q8IZH2 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC20.22■□□□□ 0.83
XRN1Q8IZH2 KLF17P1-201ENST00000547105 1126 ntBASIC20.22■□□□□ 0.83
XRN1Q8IZH2 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC20.22■□□□□ 0.83
XRN1Q8IZH2 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC20.22■□□□□ 0.83
XRN1Q8IZH2 CASP16P-204ENST00000635032 809 ntBASIC20.22■□□□□ 0.83
XRN1Q8IZH2 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC20.22■□□□□ 0.83
XRN1Q8IZH2 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC20.22■□□□□ 0.83
XRN1Q8IZH2 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
XRN1Q8IZH2 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
XRN1Q8IZH2 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
XRN1Q8IZH2 AL591122.2-201ENST00000624125 1853 ntBASIC20.22■□□□□ 0.83
XRN1Q8IZH2 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
XRN1Q8IZH2 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
XRN1Q8IZH2 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC20.22■□□□□ 0.83
XRN1Q8IZH2 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC20.22■□□□□ 0.83
XRN1Q8IZH2 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
XRN1Q8IZH2 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
XRN1Q8IZH2 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
XRN1Q8IZH2 DOC2GP-204ENST00000639052 2548 ntBASIC20.22■□□□□ 0.83
XRN1Q8IZH2 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
XRN1Q8IZH2 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
XRN1Q8IZH2 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
XRN1Q8IZH2 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC20.22■□□□□ 0.83
XRN1Q8IZH2 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC20.22■□□□□ 0.83
XRN1Q8IZH2 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC20.22■□□□□ 0.83
XRN1Q8IZH2 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC20.22■□□□□ 0.83
XRN1Q8IZH2 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC20.22■□□□□ 0.83
XRN1Q8IZH2 AC013553.1-201ENST00000560906 267 ntBASIC20.22■□□□□ 0.83
XRN1Q8IZH2 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC20.22■□□□□ 0.83
XRN1Q8IZH2 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.22■□□□□ 0.83
XRN1Q8IZH2 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
XRN1Q8IZH2 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
XRN1Q8IZH2 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
XRN1Q8IZH2 LINC02199-201ENST00000506655 2702 ntBASIC20.21■□□□□ 0.83
XRN1Q8IZH2 AL365203.3-201ENST00000609742 2057 ntBASIC20.21■□□□□ 0.83
XRN1Q8IZH2 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
XRN1Q8IZH2 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
XRN1Q8IZH2 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
XRN1Q8IZH2 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
XRN1Q8IZH2 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
XRN1Q8IZH2 FAM86KP-201ENST00000509817 987 ntBASIC20.21■□□□□ 0.83
XRN1Q8IZH2 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC20.21■□□□□ 0.83
XRN1Q8IZH2 SRP14-204ENST00000558720 780 ntTSL 2 BASIC20.21■□□□□ 0.83
XRN1Q8IZH2 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
XRN1Q8IZH2 COX5A-205ENST00000568517 582 ntTSL 3 BASIC20.21■□□□□ 0.83
XRN1Q8IZH2 AC010632.2-201ENST00000588369 1224 ntBASIC20.21■□□□□ 0.83
XRN1Q8IZH2 AL591471.1-201ENST00000621855 229 ntBASIC20.21■□□□□ 0.83
XRN1Q8IZH2 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
XRN1Q8IZH2 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.83
XRN1Q8IZH2 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC20.2■□□□□ 0.83
XRN1Q8IZH2 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC20.2■□□□□ 0.83
XRN1Q8IZH2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
XRN1Q8IZH2 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
XRN1Q8IZH2 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
XRN1Q8IZH2 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
XRN1Q8IZH2 AC067931.2-201ENST00000623655 2003 ntBASIC20.2■□□□□ 0.82
XRN1Q8IZH2 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
XRN1Q8IZH2 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC20.2■□□□□ 0.82
XRN1Q8IZH2 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
XRN1Q8IZH2 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC20.2■□□□□ 0.82
XRN1Q8IZH2 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
XRN1Q8IZH2 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
XRN1Q8IZH2 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC20.2■□□□□ 0.82
XRN1Q8IZH2 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
XRN1Q8IZH2 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC20.2■□□□□ 0.82
XRN1Q8IZH2 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
XRN1Q8IZH2 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC20.2■□□□□ 0.82
XRN1Q8IZH2 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC20.2■□□□□ 0.82
XRN1Q8IZH2 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
XRN1Q8IZH2 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
XRN1Q8IZH2 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC20.2■□□□□ 0.82
XRN1Q8IZH2 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
XRN1Q8IZH2 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
XRN1Q8IZH2 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC20.2■□□□□ 0.82
XRN1Q8IZH2 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
XRN1Q8IZH2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
XRN1Q8IZH2 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
XRN1Q8IZH2 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
XRN1Q8IZH2 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
XRN1Q8IZH2 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
XRN1Q8IZH2 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC20.19■□□□□ 0.82
XRN1Q8IZH2 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
XRN1Q8IZH2 PTGER4P2-201ENST00000328411 252 ntBASIC20.19■□□□□ 0.82
XRN1Q8IZH2 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
XRN1Q8IZH2 PTGER4P3-201ENST00000458150 252 ntBASIC20.19■□□□□ 0.82
XRN1Q8IZH2 RBM4-207ENST00000506523 654 ntTSL 3 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms