Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 MST1P2-201ENST00000457982 2291 ntBASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 DNAJB3-202ENST00000449667 1266 ntBASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 AC025181.2-201ENST00000606994 802 ntBASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 AL596442.2-201ENST00000610240 980 ntBASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM42Q8IWZ5 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 UXT-AS1-201ENST00000590504 1525 ntBASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms