Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 AC015656.1-201ENST00000624209 3578 ntBASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 AL133466.1-201ENST00000447582 150 ntBASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 LY6E-208ENST00000520531 490 ntTSL 2 BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 AC138894.2-201ENST00000602838 371 ntBASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 AP000346.4-201ENST00000614827 381 ntBASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 AC006453.1-201ENST00000636037 1257 ntBASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 MIR3147-201ENST00000577811 66 ntBASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 BX539320.1-201ENST00000623759 877 ntBASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 HLA-C-210ENST00000640219 976 ntBASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 DPM3-202ENST00000368399 517 ntBASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 MIR648-201ENST00000385046 94 ntBASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 MIR4750-201ENST00000584564 56 ntBASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.69□□□□□ -0.22
RP1L1Q8IWN7 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms