Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF135Q8IUD6 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF135Q8IUD6 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.04■□□□□ 0.16
RNF135Q8IUD6 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
RNF135Q8IUD6 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF135Q8IUD6 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
RNF135Q8IUD6 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF135Q8IUD6 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF135Q8IUD6 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF135Q8IUD6 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF135Q8IUD6 AC007274.2-201ENST00000421675 662 ntBASIC16.04■□□□□ 0.16
RNF135Q8IUD6 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF135Q8IUD6 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.04■□□□□ 0.16
RNF135Q8IUD6 AC024681.1-201ENST00000521917 487 ntBASIC16.04■□□□□ 0.16
RNF135Q8IUD6 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF135Q8IUD6 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.04■□□□□ 0.16
RNF135Q8IUD6 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.04■□□□□ 0.16
RNF135Q8IUD6 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.04■□□□□ 0.16
RNF135Q8IUD6 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RNF135Q8IUD6 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF135Q8IUD6 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF135Q8IUD6 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF135Q8IUD6 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
RNF135Q8IUD6 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF135Q8IUD6 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 AC068418.2-201ENST00000577309 3703 ntBASIC16.03■□□□□ 0.16
RNF135Q8IUD6 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.03■□□□□ 0.16
RNF135Q8IUD6 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RNF135Q8IUD6 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.02■□□□□ 0.16
RNF135Q8IUD6 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RNF135Q8IUD6 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
RNF135Q8IUD6 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RNF135Q8IUD6 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF135Q8IUD6 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.02■□□□□ 0.16
RNF135Q8IUD6 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.02■□□□□ 0.16
RNF135Q8IUD6 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.02■□□□□ 0.16
RNF135Q8IUD6 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RNF135Q8IUD6 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RNF135Q8IUD6 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF135Q8IUD6 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF135Q8IUD6 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF135Q8IUD6 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RNF135Q8IUD6 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF135Q8IUD6 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF135Q8IUD6 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF135Q8IUD6 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC16.02■□□□□ 0.16
RNF135Q8IUD6 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
RNF135Q8IUD6 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.02■□□□□ 0.16
RNF135Q8IUD6 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC16.02■□□□□ 0.16
RNF135Q8IUD6 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.02■□□□□ 0.16
RNF135Q8IUD6 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.02■□□□□ 0.16
RNF135Q8IUD6 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC16.02■□□□□ 0.16
RNF135Q8IUD6 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
RNF135Q8IUD6 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
RNF135Q8IUD6 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RNF135Q8IUD6 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RNF135Q8IUD6 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.02■□□□□ 0.15
RNF135Q8IUD6 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.02■□□□□ 0.15
RNF135Q8IUD6 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RNF135Q8IUD6 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.02■□□□□ 0.15
RNF135Q8IUD6 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms