Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 KRT17P8-201ENST00000540749 863 ntBASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD3Q7Z3D4 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 AC092933.1-201ENST00000393644 945 ntBASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 ARSEP1-201ENST00000420443 635 ntBASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 AC026434.2-201ENST00000506094 1078 ntBASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 GNRHR2-203ENST00000581100 1187 ntBASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 AL022328.1-201ENST00000610050 478 ntBASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD3Q7Z3D4 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms