Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP50Q70EL3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP50Q70EL3 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.38■□□□□ 0.37
USP50Q70EL3 CICP13-201ENST00000422015 2789 ntBASIC17.38■□□□□ 0.37
USP50Q70EL3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
USP50Q70EL3 AC009093.10-201ENST00000641956 1442 ntBASIC17.38■□□□□ 0.37
USP50Q70EL3 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP50Q70EL3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
USP50Q70EL3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
USP50Q70EL3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP50Q70EL3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP50Q70EL3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP50Q70EL3 AC006372.4-201ENST00000624122 1543 ntBASIC17.37■□□□□ 0.37
USP50Q70EL3 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP50Q70EL3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP50Q70EL3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
USP50Q70EL3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP50Q70EL3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP50Q70EL3 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
USP50Q70EL3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.37■□□□□ 0.37
USP50Q70EL3 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP50Q70EL3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP50Q70EL3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.37■□□□□ 0.37
USP50Q70EL3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP50Q70EL3 MIR566-201ENST00000385187 94 ntBASIC17.37■□□□□ 0.37
USP50Q70EL3 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
USP50Q70EL3 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP50Q70EL3 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP50Q70EL3 CELP-201ENST00000411440 1249 ntTSL 5 BASIC17.37■□□□□ 0.37
USP50Q70EL3 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC17.37■□□□□ 0.37
USP50Q70EL3 OR51A9P-201ENST00000422578 911 ntBASIC17.37■□□□□ 0.37
USP50Q70EL3 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC17.37■□□□□ 0.37
USP50Q70EL3 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC17.37■□□□□ 0.37
USP50Q70EL3 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC17.37■□□□□ 0.37
USP50Q70EL3 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC17.37■□□□□ 0.37
USP50Q70EL3 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC17.37■□□□□ 0.37
USP50Q70EL3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP50Q70EL3 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP50Q70EL3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP50Q70EL3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP50Q70EL3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP50Q70EL3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
USP50Q70EL3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP50Q70EL3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
USP50Q70EL3 AC004554.1-201ENST00000422830 1468 ntBASIC17.37■□□□□ 0.37
USP50Q70EL3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP50Q70EL3 AC025183.3-201ENST00000623526 1482 ntBASIC17.37■□□□□ 0.37
USP50Q70EL3 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP50Q70EL3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USP50Q70EL3 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.36■□□□□ 0.37
USP50Q70EL3 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17.36■□□□□ 0.37
USP50Q70EL3 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USP50Q70EL3 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC17.36■□□□□ 0.37
USP50Q70EL3 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.36■□□□□ 0.37
USP50Q70EL3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USP50Q70EL3 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
USP50Q70EL3 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP50Q70EL3 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC17.36■□□□□ 0.37
USP50Q70EL3 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC17.36■□□□□ 0.37
USP50Q70EL3 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC17.36■□□□□ 0.37
USP50Q70EL3 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
USP50Q70EL3 ACTG1P19-201ENST00000418987 1116 ntBASIC17.36■□□□□ 0.37
USP50Q70EL3 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC17.36■□□□□ 0.37
USP50Q70EL3 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC17.36■□□□□ 0.37
USP50Q70EL3 AC093826.1-201ENST00000508655 993 ntBASIC17.36■□□□□ 0.37
USP50Q70EL3 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC17.36■□□□□ 0.37
USP50Q70EL3 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
USP50Q70EL3 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC17.36■□□□□ 0.37
USP50Q70EL3 AC124068.2-201ENST00000569473 1109 ntBASIC17.36■□□□□ 0.37
USP50Q70EL3 AC010632.2-201ENST00000588369 1224 ntBASIC17.36■□□□□ 0.37
USP50Q70EL3 RPS5-204ENST00000598098 536 ntTSL 2 BASIC17.36■□□□□ 0.37
USP50Q70EL3 AC009145.4-201ENST00000625119 1294 ntBASIC17.36■□□□□ 0.37
USP50Q70EL3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP50Q70EL3 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP50Q70EL3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP50Q70EL3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USP50Q70EL3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP50Q70EL3 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC17.36■□□□□ 0.37
USP50Q70EL3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP50Q70EL3 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP50Q70EL3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.36■□□□□ 0.37
USP50Q70EL3 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
USP50Q70EL3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP50Q70EL3 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC17.36■□□□□ 0.37
USP50Q70EL3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP50Q70EL3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.36■□□□□ 0.37
USP50Q70EL3 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.36■□□□□ 0.37
USP50Q70EL3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USP50Q70EL3 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP50Q70EL3 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC17.36■□□□□ 0.37
USP50Q70EL3 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC17.36■□□□□ 0.37
USP50Q70EL3 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC17.35■□□□□ 0.37
USP50Q70EL3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP50Q70EL3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
USP50Q70EL3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP50Q70EL3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP50Q70EL3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
USP50Q70EL3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP50Q70EL3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP50Q70EL3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms