Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 APP-205ENST00000358918 2366 ntTSL 5 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 CICP17-201ENST00000418553 2377 ntBASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 KRT8P22-201ENST00000562317 1415 ntBASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 FAM58DP-201ENST00000428076 619 ntBASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 HTR5BP-201ENST00000430851 1154 ntBASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 AC074044.1-201ENST00000609673 707 ntBASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 BX640515.1-201ENST00000617215 977 ntBASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 AC105339.1-204ENST00000636249 355 ntBASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 AL033527.5-202ENST00000641632 1098 ntBASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 AL157414.3-201ENST00000624276 1954 ntBASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 AC016397.2-201ENST00000624848 1985 ntBASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC10.35□□□□□ -0.75
LINC00242Q5T6M2 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC10.34□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms