Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDR1Q08345 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC18.39■□□□□ 0.54
DDR1Q08345 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.39■□□□□ 0.54
DDR1Q08345 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
DDR1Q08345 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
DDR1Q08345 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
DDR1Q08345 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
DDR1Q08345 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
DDR1Q08345 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DDR1Q08345 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
DDR1Q08345 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDR1Q08345 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.39■□□□□ 0.53
DDR1Q08345 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DDR1Q08345 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDR1Q08345 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
DDR1Q08345 HLA-DMA-203ENST00000395305 777 ntBASIC18.39■□□□□ 0.53
DDR1Q08345 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DDR1Q08345 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC18.39■□□□□ 0.53
DDR1Q08345 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DDR1Q08345 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC18.39■□□□□ 0.53
DDR1Q08345 DNM1P51-201ENST00000558149 522 ntBASIC18.39■□□□□ 0.53
DDR1Q08345 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DDR1Q08345 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC18.39■□□□□ 0.53
DDR1Q08345 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC18.39■□□□□ 0.53
DDR1Q08345 RN7SL596P-201ENST00000582123 288 ntBASIC18.39■□□□□ 0.53
DDR1Q08345 RN7SL470P-201ENST00000583069 259 ntBASIC18.39■□□□□ 0.53
DDR1Q08345 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDR1Q08345 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC18.39■□□□□ 0.53
DDR1Q08345 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DDR1Q08345 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDR1Q08345 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.39■□□□□ 0.53
DDR1Q08345 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDR1Q08345 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
DDR1Q08345 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.39■□□□□ 0.53
DDR1Q08345 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DDR1Q08345 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DDR1Q08345 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDR1Q08345 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDR1Q08345 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDR1Q08345 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDR1Q08345 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
DDR1Q08345 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDR1Q08345 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
DDR1Q08345 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DDR1Q08345 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.38■□□□□ 0.53
DDR1Q08345 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDR1Q08345 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DDR1Q08345 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDR1Q08345 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.38■□□□□ 0.53
DDR1Q08345 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDR1Q08345 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDR1Q08345 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDR1Q08345 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDR1Q08345 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
DDR1Q08345 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDR1Q08345 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDR1Q08345 PTPA-215ENST00000432124 567 ntTSL 4 BASIC18.38■□□□□ 0.53
DDR1Q08345 DUX4L50-201ENST00000455245 715 ntBASIC18.38■□□□□ 0.53
DDR1Q08345 RHEB-207ENST00000496004 744 ntTSL 2 BASIC18.38■□□□□ 0.53
DDR1Q08345 AC084752.1-201ENST00000509766 622 ntBASIC18.38■□□□□ 0.53
DDR1Q08345 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC18.38■□□□□ 0.53
DDR1Q08345 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DDR1Q08345 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DDR1Q08345 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC18.38■□□□□ 0.53
DDR1Q08345 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC18.38■□□□□ 0.53
DDR1Q08345 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDR1Q08345 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC18.38■□□□□ 0.53
DDR1Q08345 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC18.38■□□□□ 0.53
DDR1Q08345 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC18.38■□□□□ 0.53
DDR1Q08345 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
DDR1Q08345 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDR1Q08345 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
DDR1Q08345 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDR1Q08345 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDR1Q08345 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.38■□□□□ 0.53
DDR1Q08345 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DDR1Q08345 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.38■□□□□ 0.53
DDR1Q08345 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DDR1Q08345 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDR1Q08345 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.37■□□□□ 0.53
DDR1Q08345 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
DDR1Q08345 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDR1Q08345 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
DDR1Q08345 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDR1Q08345 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDR1Q08345 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
DDR1Q08345 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDR1Q08345 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
DDR1Q08345 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
DDR1Q08345 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC18.37■□□□□ 0.53
DDR1Q08345 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
DDR1Q08345 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC18.37■□□□□ 0.53
DDR1Q08345 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC18.37■□□□□ 0.53
DDR1Q08345 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC18.37■□□□□ 0.53
DDR1Q08345 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC18.37■□□□□ 0.53
DDR1Q08345 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC18.37■□□□□ 0.53
DDR1Q08345 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
DDR1Q08345 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDR1Q08345 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDR1Q08345 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms