Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGCS1Q01581 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
HMGCS1Q01581 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.58□□□□□ -0.08
HMGCS1Q01581 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.58□□□□□ -0.08
HMGCS1Q01581 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.58□□□□□ -0.08
HMGCS1Q01581 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.58□□□□□ -0.08
HMGCS1Q01581 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.58□□□□□ -0.08
HMGCS1Q01581 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.58□□□□□ -0.08
HMGCS1Q01581 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HMGCS1Q01581 SPCS2P1-201ENST00000561636 679 ntBASIC14.58□□□□□ -0.08
HMGCS1Q01581 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
HMGCS1Q01581 AL096865.1-201ENST00000606796 927 ntBASIC14.58□□□□□ -0.08
HMGCS1Q01581 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.58□□□□□ -0.08
HMGCS1Q01581 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.58□□□□□ -0.08
HMGCS1Q01581 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HMGCS1Q01581 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
HMGCS1Q01581 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.58□□□□□ -0.08
HMGCS1Q01581 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
HMGCS1Q01581 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGCS1Q01581 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGCS1Q01581 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGCS1Q01581 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGCS1Q01581 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGCS1Q01581 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGCS1Q01581 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
HMGCS1Q01581 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
HMGCS1Q01581 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.58□□□□□ -0.08
HMGCS1Q01581 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HMGCS1Q01581 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGCS1Q01581 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGCS1Q01581 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
HMGCS1Q01581 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGCS1Q01581 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
HMGCS1Q01581 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.58□□□□□ -0.08
HMGCS1Q01581 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGCS1Q01581 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
HMGCS1Q01581 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
HMGCS1Q01581 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
HMGCS1Q01581 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGCS1Q01581 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCS1Q01581 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCS1Q01581 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
HMGCS1Q01581 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCS1Q01581 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCS1Q01581 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCS1Q01581 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCS1Q01581 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCS1Q01581 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCS1Q01581 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.57□□□□□ -0.08
HMGCS1Q01581 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.57□□□□□ -0.08
HMGCS1Q01581 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
HMGCS1Q01581 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCS1Q01581 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
HMGCS1Q01581 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCS1Q01581 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
HMGCS1Q01581 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.57□□□□□ -0.08
HMGCS1Q01581 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
HMGCS1Q01581 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCS1Q01581 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCS1Q01581 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
HMGCS1Q01581 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
HMGCS1Q01581 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.57□□□□□ -0.08
HMGCS1Q01581 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.57□□□□□ -0.08
HMGCS1Q01581 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
HMGCS1Q01581 BCRP1-201ENST00000444246 691 ntBASIC14.57□□□□□ -0.08
HMGCS1Q01581 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCS1Q01581 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.57□□□□□ -0.08
HMGCS1Q01581 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.57□□□□□ -0.08
HMGCS1Q01581 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.57□□□□□ -0.08
HMGCS1Q01581 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.57□□□□□ -0.08
HMGCS1Q01581 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCS1Q01581 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.57□□□□□ -0.08
HMGCS1Q01581 MIR8072-201ENST00000614241 80 ntBASIC14.57□□□□□ -0.08
HMGCS1Q01581 AJ011932.1-201ENST00000621707 465 ntBASIC14.57□□□□□ -0.08
HMGCS1Q01581 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCS1Q01581 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.57□□□□□ -0.08
HMGCS1Q01581 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCS1Q01581 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCS1Q01581 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCS1Q01581 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCS1Q01581 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCS1Q01581 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCS1Q01581 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCS1Q01581 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.57□□□□□ -0.08
HMGCS1Q01581 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.57□□□□□ -0.08
HMGCS1Q01581 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCS1Q01581 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
HMGCS1Q01581 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.57□□□□□ -0.08
HMGCS1Q01581 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
HMGCS1Q01581 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCS1Q01581 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCS1Q01581 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCS1Q01581 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCS1Q01581 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCS1Q01581 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCS1Q01581 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCS1Q01581 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCS1Q01581 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.56□□□□□ -0.08
HMGCS1Q01581 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCS1Q01581 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms