Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AC107373.2-201ENST00000607735 490 ntBASIC15.72■□□□□ 0.11
MMP13P45452 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
MMP13P45452 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MMP13P45452 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MMP13P45452 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MMP13P45452 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
MMP13P45452 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.72■□□□□ 0.11
MMP13P45452 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
MMP13P45452 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
MMP13P45452 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.72■□□□□ 0.11
MMP13P45452 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MMP13P45452 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MMP13P45452 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MMP13P45452 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
MMP13P45452 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
MMP13P45452 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
MMP13P45452 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MMP13P45452 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
MMP13P45452 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
MMP13P45452 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
MMP13P45452 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MMP13P45452 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
MMP13P45452 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
MMP13P45452 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
MMP13P45452 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
MMP13P45452 AP000845.1-201ENST00000581677 2131 ntBASIC15.71■□□□□ 0.11
MMP13P45452 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
MMP13P45452 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
MMP13P45452 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.71■□□□□ 0.11
MMP13P45452 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MMP13P45452 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.71■□□□□ 0.11
MMP13P45452 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.71■□□□□ 0.11
MMP13P45452 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
MMP13P45452 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MMP13P45452 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
MMP13P45452 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.71■□□□□ 0.11
MMP13P45452 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
MMP13P45452 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MMP13P45452 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
MMP13P45452 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MMP13P45452 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MMP13P45452 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.71■□□□□ 0.11
MMP13P45452 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.71■□□□□ 0.11
MMP13P45452 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MMP13P45452 AC134915.1-201ENST00000426461 574 ntBASIC15.71■□□□□ 0.11
MMP13P45452 AL442647.2-201ENST00000429864 857 ntBASIC15.71■□□□□ 0.11
MMP13P45452 CRB3P1-201ENST00000449338 276 ntBASIC15.71■□□□□ 0.11
MMP13P45452 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.71■□□□□ 0.11
MMP13P45452 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.71■□□□□ 0.11
MMP13P45452 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.71■□□□□ 0.11
MMP13P45452 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.71■□□□□ 0.11
MMP13P45452 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.71■□□□□ 0.11
MMP13P45452 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.71■□□□□ 0.11
MMP13P45452 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.71■□□□□ 0.11
MMP13P45452 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.71■□□□□ 0.11
MMP13P45452 TMEM261P1-201ENST00000604899 340 ntBASIC15.71■□□□□ 0.11
MMP13P45452 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MMP13P45452 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MMP13P45452 PCDHA3-202ENST00000532566 4594 ntBASIC15.71■□□□□ 0.11
MMP13P45452 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.71■□□□□ 0.11
MMP13P45452 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MMP13P45452 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.71■□□□□ 0.11
MMP13P45452 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MMP13P45452 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MMP13P45452 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.71■□□□□ 0.11
MMP13P45452 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
MMP13P45452 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
MMP13P45452 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MMP13P45452 AL359881.3-201ENST00000602640 1721 ntBASIC15.71■□□□□ 0.1
MMP13P45452 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
MMP13P45452 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
MMP13P45452 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
MMP13P45452 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.71■□□□□ 0.1
MMP13P45452 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.71■□□□□ 0.1
MMP13P45452 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP13P45452 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.7■□□□□ 0.1
MMP13P45452 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
MMP13P45452 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP13P45452 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP13P45452 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.7■□□□□ 0.1
MMP13P45452 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15.7■□□□□ 0.1
MMP13P45452 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MMP13P45452 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.7■□□□□ 0.1
MMP13P45452 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MMP13P45452 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MMP13P45452 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
MMP13P45452 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP13P45452 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MMP13P45452 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP13P45452 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP13P45452 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP13P45452 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MMP13P45452 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP13P45452 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
MMP13P45452 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.7■□□□□ 0.1
MMP13P45452 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP13P45452 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.7■□□□□ 0.1
MMP13P45452 ELK1P1-201ENST00000485699 580 ntBASIC15.7■□□□□ 0.1
MMP13P45452 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.7■□□□□ 0.1
MMP13P45452 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms