Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.95■□□□□ 0.14
CHRNA3P32297 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CHRNA3P32297 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CHRNA3P32297 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA3P32297 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.95■□□□□ 0.14
CHRNA3P32297 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA3P32297 AP001267.2-201ENST00000532619 2086 ntBASIC15.95■□□□□ 0.14
CHRNA3P32297 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA3P32297 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CHRNA3P32297 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA3P32297 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA3P32297 TOMM22P5-201ENST00000416399 439 ntBASIC15.95■□□□□ 0.14
CHRNA3P32297 AC098850.1-201ENST00000419919 790 ntBASIC15.95■□□□□ 0.14
CHRNA3P32297 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.95■□□□□ 0.14
CHRNA3P32297 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.95■□□□□ 0.14
CHRNA3P32297 AC104596.2-201ENST00000512793 793 ntBASIC15.95■□□□□ 0.14
CHRNA3P32297 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.95■□□□□ 0.14
CHRNA3P32297 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.95■□□□□ 0.14
CHRNA3P32297 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.95■□□□□ 0.14
CHRNA3P32297 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CHRNA3P32297 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CHRNA3P32297 AL158212.4-201ENST00000624062 1286 ntBASIC15.95■□□□□ 0.14
CHRNA3P32297 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.95■□□□□ 0.14
CHRNA3P32297 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA3P32297 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA3P32297 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA3P32297 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA3P32297 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA3P32297 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CHRNA3P32297 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA3P32297 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA3P32297 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA3P32297 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CHRNA3P32297 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA3P32297 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.95■□□□□ 0.14
CHRNA3P32297 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA3P32297 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA3P32297 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
CHRNA3P32297 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA3P32297 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.95■□□□□ 0.14
CHRNA3P32297 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CHRNA3P32297 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA3P32297 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA3P32297 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA3P32297 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA3P32297 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CHRNA3P32297 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
CHRNA3P32297 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA3P32297 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.94■□□□□ 0.14
CHRNA3P32297 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA3P32297 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA3P32297 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA3P32297 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.94■□□□□ 0.14
CHRNA3P32297 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA3P32297 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CHRNA3P32297 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.94■□□□□ 0.14
CHRNA3P32297 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.94■□□□□ 0.14
CHRNA3P32297 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA3P32297 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA3P32297 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.94■□□□□ 0.14
CHRNA3P32297 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA3P32297 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA3P32297 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.94■□□□□ 0.14
CHRNA3P32297 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CHRNA3P32297 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA3P32297 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA3P32297 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA3P32297 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA3P32297 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA3P32297 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.94■□□□□ 0.14
CHRNA3P32297 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.94■□□□□ 0.14
CHRNA3P32297 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.94■□□□□ 0.14
CHRNA3P32297 RN7SL399P-201ENST00000471648 279 ntBASIC15.94■□□□□ 0.14
CHRNA3P32297 ELK1P1-201ENST00000485699 580 ntBASIC15.94■□□□□ 0.14
CHRNA3P32297 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.94■□□□□ 0.14
CHRNA3P32297 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.94■□□□□ 0.14
CHRNA3P32297 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.94■□□□□ 0.14
CHRNA3P32297 AL391069.4-201ENST00000609583 481 ntBASIC15.94■□□□□ 0.14
CHRNA3P32297 MIR8072-201ENST00000614241 80 ntBASIC15.94■□□□□ 0.14
CHRNA3P32297 AC007326.2-201ENST00000624224 7579 ntBASIC15.94■□□□□ 0.14
CHRNA3P32297 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA3P32297 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.94■□□□□ 0.14
CHRNA3P32297 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.94■□□□□ 0.14
CHRNA3P32297 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA3P32297 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
CHRNA3P32297 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA3P32297 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA3P32297 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CHRNA3P32297 AC015656.1-201ENST00000624209 3578 ntBASIC15.94■□□□□ 0.14
CHRNA3P32297 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA3P32297 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA3P32297 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.94■□□□□ 0.14
CHRNA3P32297 LINC01230-201ENST00000625222 3017 ntBASIC15.94■□□□□ 0.14
CHRNA3P32297 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA3P32297 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CHRNA3P32297 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA3P32297 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
CHRNA3P32297 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA3P32297 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA3P32297 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms