Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 CTBP2P3-201ENST00000585629 1255 ntBASIC14.03□□□□□ -0.16
LCN1P31025 WFDC1-204ENST00000613603 549 ntBASIC14.03□□□□□ -0.16
LCN1P31025 CU634019.7-201ENST00000624153 1185 ntBASIC14.03□□□□□ -0.16
LCN1P31025 FP236241.2-201ENST00000624906 1185 ntBASIC14.03□□□□□ -0.16
LCN1P31025 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LCN1P31025 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.03□□□□□ -0.16
LCN1P31025 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.03□□□□□ -0.16
LCN1P31025 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
LCN1P31025 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LCN1P31025 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LCN1P31025 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LCN1P31025 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LCN1P31025 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.03□□□□□ -0.16
LCN1P31025 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LCN1P31025 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LCN1P31025 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LCN1P31025 ACE3P-201ENST00000423435 1973 ntBASIC14.03□□□□□ -0.16
LCN1P31025 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.03□□□□□ -0.16
LCN1P31025 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.03□□□□□ -0.16
LCN1P31025 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LCN1P31025 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LCN1P31025 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
LCN1P31025 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.03□□□□□ -0.16
LCN1P31025 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LCN1P31025 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LCN1P31025 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LCN1P31025 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
LCN1P31025 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
LCN1P31025 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
LCN1P31025 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
LCN1P31025 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.02□□□□□ -0.16
LCN1P31025 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
LCN1P31025 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LCN1P31025 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.02□□□□□ -0.16
LCN1P31025 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LCN1P31025 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.02□□□□□ -0.16
LCN1P31025 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.02□□□□□ -0.16
LCN1P31025 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LCN1P31025 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
LCN1P31025 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LCN1P31025 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LCN1P31025 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LCN1P31025 AP006294.1-201ENST00000415407 339 ntBASIC14.02□□□□□ -0.17
LCN1P31025 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LCN1P31025 AC011495.1-201ENST00000498085 584 ntBASIC14.02□□□□□ -0.17
LCN1P31025 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LCN1P31025 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.02□□□□□ -0.17
LCN1P31025 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LCN1P31025 DUX4L47-201ENST00000566374 394 ntBASIC14.02□□□□□ -0.17
LCN1P31025 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.02□□□□□ -0.17
LCN1P31025 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
LCN1P31025 AL033527.5-201ENST00000641382 801 ntBASIC14.02□□□□□ -0.17
LCN1P31025 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LCN1P31025 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
LCN1P31025 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LCN1P31025 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LCN1P31025 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
LCN1P31025 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
LCN1P31025 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LCN1P31025 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LCN1P31025 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
LCN1P31025 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.02□□□□□ -0.17
LCN1P31025 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LCN1P31025 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.02□□□□□ -0.17
LCN1P31025 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LCN1P31025 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LCN1P31025 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.01□□□□□ -0.17
LCN1P31025 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LCN1P31025 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.01□□□□□ -0.17
LCN1P31025 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.01□□□□□ -0.17
LCN1P31025 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LCN1P31025 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.01□□□□□ -0.17
LCN1P31025 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.01□□□□□ -0.17
LCN1P31025 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
LCN1P31025 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LCN1P31025 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LCN1P31025 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.01□□□□□ -0.17
LCN1P31025 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.01□□□□□ -0.17
LCN1P31025 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LCN1P31025 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LCN1P31025 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LCN1P31025 AC067750.1-201ENST00000608826 6545 ntBASIC14.01□□□□□ -0.17
LCN1P31025 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LCN1P31025 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LCN1P31025 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LCN1P31025 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LCN1P31025 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.01□□□□□ -0.17
LCN1P31025 ACTBP8-201ENST00000403258 1108 ntBASIC14.01□□□□□ -0.17
LCN1P31025 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LCN1P31025 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LCN1P31025 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LCN1P31025 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.01□□□□□ -0.17
LCN1P31025 GIMAP3P-201ENST00000495150 836 ntBASIC14.01□□□□□ -0.17
LCN1P31025 AC022137.2-201ENST00000503482 481 ntBASIC14.01□□□□□ -0.17
LCN1P31025 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
LCN1P31025 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LCN1P31025 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.01□□□□□ -0.17
LCN1P31025 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LCN1P31025 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LCN1P31025 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms