Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATF3P18847 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATF3P18847 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.3■□□□□ 0.84
ATF3P18847 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATF3P18847 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC20.3■□□□□ 0.84
ATF3P18847 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC20.3■□□□□ 0.84
ATF3P18847 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.3■□□□□ 0.84
ATF3P18847 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATF3P18847 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATF3P18847 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ATF3P18847 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATF3P18847 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATF3P18847 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC20.29■□□□□ 0.84
ATF3P18847 FRMD6-AS1-201ENST00000617151 2229 ntBASIC20.29■□□□□ 0.84
ATF3P18847 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATF3P18847 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
ATF3P18847 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
ATF3P18847 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATF3P18847 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC20.29■□□□□ 0.84
ATF3P18847 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATF3P18847 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ATF3P18847 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ATF3P18847 KRT8P1-201ENST00000557533 1207 ntBASIC20.29■□□□□ 0.84
ATF3P18847 MVK-217ENST00000639206 367 ntTSL 5 BASIC20.29■□□□□ 0.84
ATF3P18847 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ATF3P18847 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATF3P18847 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ATF3P18847 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATF3P18847 FTX-216ENST00000638985 1367 ntTSL 5 BASIC20.29■□□□□ 0.84
ATF3P18847 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC20.29■□□□□ 0.84
ATF3P18847 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATF3P18847 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC20.29■□□□□ 0.84
ATF3P18847 AC013726.1-201ENST00000563747 2285 ntBASIC20.29■□□□□ 0.84
ATF3P18847 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATF3P18847 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ATF3P18847 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC20.29■□□□□ 0.84
ATF3P18847 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATF3P18847 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC20.29■□□□□ 0.84
ATF3P18847 API5-208ENST00000531273 1868 ntTSL 2 BASIC20.28■□□□□ 0.84
ATF3P18847 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATF3P18847 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATF3P18847 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATF3P18847 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
ATF3P18847 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC20.28■□□□□ 0.84
ATF3P18847 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATF3P18847 PCDHA12-202ENST00000613593 2588 ntBASIC20.28■□□□□ 0.84
ATF3P18847 CICP13-201ENST00000422015 2789 ntBASIC20.28■□□□□ 0.84
ATF3P18847 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
ATF3P18847 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATF3P18847 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATF3P18847 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
ATF3P18847 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATF3P18847 AC073869.2-201ENST00000417338 1026 ntBASIC20.28■□□□□ 0.84
ATF3P18847 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATF3P18847 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC20.28■□□□□ 0.84
ATF3P18847 OR5BD1P-201ENST00000532527 817 ntBASIC20.28■□□□□ 0.84
ATF3P18847 AC226150.1-201ENST00000544259 466 ntBASIC20.28■□□□□ 0.84
ATF3P18847 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC20.28■□□□□ 0.84
ATF3P18847 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC20.28■□□□□ 0.84
ATF3P18847 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC20.28■□□□□ 0.84
ATF3P18847 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC20.28■□□□□ 0.84
ATF3P18847 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATF3P18847 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATF3P18847 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC20.28■□□□□ 0.84
ATF3P18847 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATF3P18847 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATF3P18847 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATF3P18847 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATF3P18847 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATF3P18847 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC20.27■□□□□ 0.84
ATF3P18847 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATF3P18847 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC20.27■□□□□ 0.84
ATF3P18847 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATF3P18847 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC20.27■□□□□ 0.84
ATF3P18847 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ATF3P18847 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATF3P18847 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATF3P18847 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATF3P18847 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATF3P18847 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
ATF3P18847 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
ATF3P18847 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATF3P18847 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATF3P18847 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ATF3P18847 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATF3P18847 AL672207.1-201ENST00000328462 1570 ntBASIC20.27■□□□□ 0.84
ATF3P18847 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATF3P18847 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC20.27■□□□□ 0.84
ATF3P18847 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
ATF3P18847 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATF3P18847 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
ATF3P18847 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC20.27■□□□□ 0.84
ATF3P18847 HNRNPA1P58-201ENST00000403629 610 ntBASIC20.27■□□□□ 0.84
ATF3P18847 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC20.27■□□□□ 0.84
ATF3P18847 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC20.27■□□□□ 0.84
ATF3P18847 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC20.27■□□□□ 0.84
ATF3P18847 PPIA-208ENST00000489459 907 ntTSL 2 BASIC20.27■□□□□ 0.84
ATF3P18847 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC20.27■□□□□ 0.84
ATF3P18847 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
ATF3P18847 AP005264.6-204ENST00000588436 719 ntBASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms