Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12.37□□□□□ -0.43
DEFA4P12838 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 SATB1-217ENST00000493952 626 ntTSL 3 BASIC12.37□□□□□ -0.43
DEFA4P12838 HLA-J-203ENST00000494367 1087 ntBASIC12.37□□□□□ -0.43
DEFA4P12838 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.37□□□□□ -0.43
DEFA4P12838 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.37□□□□□ -0.43
DEFA4P12838 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.37□□□□□ -0.43
DEFA4P12838 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC12.37□□□□□ -0.43
DEFA4P12838 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.37□□□□□ -0.43
DEFA4P12838 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.37□□□□□ -0.43
DEFA4P12838 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
DEFA4P12838 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
DEFA4P12838 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.37□□□□□ -0.43
DEFA4P12838 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
DEFA4P12838 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.37□□□□□ -0.43
DEFA4P12838 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 AL928921.2-201ENST00000641325 2442 ntBASIC12.37□□□□□ -0.43
DEFA4P12838 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
DEFA4P12838 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
DEFA4P12838 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.37□□□□□ -0.43
DEFA4P12838 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.37□□□□□ -0.43
DEFA4P12838 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC12.37□□□□□ -0.43
DEFA4P12838 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
DEFA4P12838 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
DEFA4P12838 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
DEFA4P12838 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
DEFA4P12838 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
DEFA4P12838 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
DEFA4P12838 MTHFR-210ENST00000641407 2387 ntBASIC12.36□□□□□ -0.43
DEFA4P12838 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
DEFA4P12838 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
DEFA4P12838 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.36□□□□□ -0.43
DEFA4P12838 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
DEFA4P12838 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
DEFA4P12838 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
DEFA4P12838 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
DEFA4P12838 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
DEFA4P12838 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
DEFA4P12838 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
DEFA4P12838 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
DEFA4P12838 FO538757.1-201ENST00000623083 1397 ntBASIC12.36□□□□□ -0.43
DEFA4P12838 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
DEFA4P12838 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
DEFA4P12838 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
DEFA4P12838 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
DEFA4P12838 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
DEFA4P12838 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
DEFA4P12838 RPL5P21-201ENST00000404620 815 ntBASIC12.36□□□□□ -0.43
DEFA4P12838 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC12.36□□□□□ -0.43
DEFA4P12838 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC12.36□□□□□ -0.43
DEFA4P12838 FAM86GP-201ENST00000448322 971 ntBASIC12.36□□□□□ -0.43
DEFA4P12838 RN7SL618P-201ENST00000477850 296 ntBASIC12.36□□□□□ -0.43
DEFA4P12838 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
DEFA4P12838 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.36□□□□□ -0.43
DEFA4P12838 AC069120.2-201ENST00000524091 540 ntBASIC12.36□□□□□ -0.43
DEFA4P12838 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.36□□□□□ -0.43
DEFA4P12838 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
DEFA4P12838 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
DEFA4P12838 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.36□□□□□ -0.43
DEFA4P12838 AC027612.4-201ENST00000605371 583 ntBASIC12.36□□□□□ -0.43
DEFA4P12838 GPER1-207ENST00000619052 571 ntTSL 2 BASIC12.36□□□□□ -0.43
DEFA4P12838 Z92544.3-201ENST00000624747 417 ntBASIC12.36□□□□□ -0.43
DEFA4P12838 AL033527.5-202ENST00000641632 1098 ntBASIC12.36□□□□□ -0.43
DEFA4P12838 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
DEFA4P12838 STRCP1-201ENST00000509801 5328 ntBASIC12.36□□□□□ -0.43
DEFA4P12838 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
DEFA4P12838 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
DEFA4P12838 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
DEFA4P12838 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
DEFA4P12838 CICP11-201ENST00000434745 2827 ntBASIC12.36□□□□□ -0.43
DEFA4P12838 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
DEFA4P12838 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.36□□□□□ -0.43
DEFA4P12838 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
DEFA4P12838 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
DEFA4P12838 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
DEFA4P12838 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
DEFA4P12838 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms