Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.92□□□□□ -0.18
THBS1P07996 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
THBS1P07996 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
THBS1P07996 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
THBS1P07996 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
THBS1P07996 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.92□□□□□ -0.18
THBS1P07996 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
THBS1P07996 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
THBS1P07996 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
THBS1P07996 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
THBS1P07996 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
THBS1P07996 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.92□□□□□ -0.18
THBS1P07996 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.92□□□□□ -0.18
THBS1P07996 SSR1P1-201ENST00000407630 814 ntBASIC13.92□□□□□ -0.18
THBS1P07996 AC087499.6-201ENST00000411576 835 ntBASIC13.92□□□□□ -0.18
THBS1P07996 COX5BP8-201ENST00000416911 349 ntBASIC13.92□□□□□ -0.18
THBS1P07996 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.92□□□□□ -0.18
THBS1P07996 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
THBS1P07996 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.92□□□□□ -0.18
THBS1P07996 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.92□□□□□ -0.18
THBS1P07996 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.92□□□□□ -0.18
THBS1P07996 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.92□□□□□ -0.18
THBS1P07996 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.92□□□□□ -0.18
THBS1P07996 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
THBS1P07996 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
THBS1P07996 TMEM261P1-201ENST00000604899 340 ntBASIC13.92□□□□□ -0.18
THBS1P07996 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.92□□□□□ -0.18
THBS1P07996 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
THBS1P07996 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
THBS1P07996 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.92□□□□□ -0.18
THBS1P07996 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.92□□□□□ -0.18
THBS1P07996 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
THBS1P07996 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.92□□□□□ -0.18
THBS1P07996 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
THBS1P07996 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
THBS1P07996 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
THBS1P07996 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
THBS1P07996 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
THBS1P07996 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
THBS1P07996 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.92□□□□□ -0.18
THBS1P07996 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
THBS1P07996 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
THBS1P07996 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
THBS1P07996 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.92□□□□□ -0.18
THBS1P07996 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
THBS1P07996 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
THBS1P07996 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
THBS1P07996 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
THBS1P07996 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
THBS1P07996 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
THBS1P07996 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
THBS1P07996 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
THBS1P07996 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.91□□□□□ -0.18
THBS1P07996 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.91□□□□□ -0.18
THBS1P07996 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
THBS1P07996 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
THBS1P07996 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.91□□□□□ -0.18
THBS1P07996 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
THBS1P07996 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
THBS1P07996 INTS4P1-203ENST00000641008 3683 ntBASIC13.91□□□□□ -0.18
THBS1P07996 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.91□□□□□ -0.18
THBS1P07996 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
THBS1P07996 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
THBS1P07996 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
THBS1P07996 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.91□□□□□ -0.18
THBS1P07996 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
THBS1P07996 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
THBS1P07996 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
THBS1P07996 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.91□□□□□ -0.18
THBS1P07996 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
THBS1P07996 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.91□□□□□ -0.18
THBS1P07996 GK-202ENST00000378941 458 ntTSL 3 BASIC13.91□□□□□ -0.18
THBS1P07996 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
THBS1P07996 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
THBS1P07996 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.91□□□□□ -0.18
THBS1P07996 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
THBS1P07996 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
THBS1P07996 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.91□□□□□ -0.18
THBS1P07996 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
THBS1P07996 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.91□□□□□ -0.18
THBS1P07996 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.91□□□□□ -0.18
THBS1P07996 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.91□□□□□ -0.18
THBS1P07996 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
THBS1P07996 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.91□□□□□ -0.18
THBS1P07996 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
THBS1P07996 AP001582.1-201ENST00000525856 295 ntBASIC13.91□□□□□ -0.18
THBS1P07996 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.91□□□□□ -0.18
THBS1P07996 AC123567.1-201ENST00000548294 1261 ntBASIC13.91□□□□□ -0.18
THBS1P07996 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.91□□□□□ -0.18
THBS1P07996 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.91□□□□□ -0.18
THBS1P07996 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.91□□□□□ -0.18
THBS1P07996 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.91□□□□□ -0.18
THBS1P07996 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.91□□□□□ -0.18
THBS1P07996 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.91□□□□□ -0.18
THBS1P07996 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.91□□□□□ -0.18
THBS1P07996 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.91□□□□□ -0.18
THBS1P07996 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.91□□□□□ -0.18
THBS1P07996 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.91□□□□□ -0.18
THBS1P07996 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
THBS1P07996 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms