Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN1P07384 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.94□□□□□ -0.02
CAPN1P07384 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.94□□□□□ -0.02
CAPN1P07384 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN1P07384 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN1P07384 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN1P07384 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.94□□□□□ -0.02
CAPN1P07384 SNX18-202ENST00000343017 3140 ntBASIC14.94□□□□□ -0.02
CAPN1P07384 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN1P07384 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN1P07384 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN1P07384 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN1P07384 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN1P07384 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.94□□□□□ -0.02
CAPN1P07384 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CAPN1P07384 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CAPN1P07384 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.94□□□□□ -0.02
CAPN1P07384 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN1P07384 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.94□□□□□ -0.02
CAPN1P07384 ATP5G2P4-201ENST00000442175 420 ntBASIC14.94□□□□□ -0.02
CAPN1P07384 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CAPN1P07384 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CAPN1P07384 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.94□□□□□ -0.02
CAPN1P07384 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.94□□□□□ -0.02
CAPN1P07384 HILS1-202ENST00000545329 423 ntBASIC14.94□□□□□ -0.02
CAPN1P07384 AC092552.1-201ENST00000547243 906 ntBASIC14.94□□□□□ -0.02
CAPN1P07384 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CAPN1P07384 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.94□□□□□ -0.02
CAPN1P07384 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
CAPN1P07384 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
CAPN1P07384 AC106886.1-201ENST00000568660 600 ntBASIC14.94□□□□□ -0.02
CAPN1P07384 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.94□□□□□ -0.02
CAPN1P07384 AL158212.4-201ENST00000624062 1286 ntBASIC14.94□□□□□ -0.02
CAPN1P07384 AL645728.2-202ENST00000641679 227 ntBASIC14.94□□□□□ -0.02
CAPN1P07384 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CAPN1P07384 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.94□□□□□ -0.02
CAPN1P07384 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CAPN1P07384 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
CAPN1P07384 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN1P07384 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
CAPN1P07384 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.94□□□□□ -0.02
CAPN1P07384 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.94□□□□□ -0.02
CAPN1P07384 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN1P07384 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN1P07384 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CAPN1P07384 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CAPN1P07384 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN1P07384 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN1P07384 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CAPN1P07384 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
CAPN1P07384 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN1P07384 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CAPN1P07384 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN1P07384 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN1P07384 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
CAPN1P07384 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CAPN1P07384 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN1P07384 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CAPN1P07384 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN1P07384 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.93□□□□□ -0.02
CAPN1P07384 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.93□□□□□ -0.02
CAPN1P07384 GPR53P-205ENST00000457298 1084 ntBASIC14.93□□□□□ -0.02
CAPN1P07384 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.93□□□□□ -0.02
CAPN1P07384 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.93□□□□□ -0.02
CAPN1P07384 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.93□□□□□ -0.02
CAPN1P07384 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN1P07384 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.93□□□□□ -0.02
CAPN1P07384 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.93□□□□□ -0.02
CAPN1P07384 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN1P07384 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.93□□□□□ -0.02
CAPN1P07384 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CAPN1P07384 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.93□□□□□ -0.02
CAPN1P07384 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN1P07384 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.93□□□□□ -0.02
CAPN1P07384 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN1P07384 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.93□□□□□ -0.02
CAPN1P07384 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN1P07384 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN1P07384 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CAPN1P07384 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.93□□□□□ -0.02
CAPN1P07384 CLK3P2-201ENST00000427566 1453 ntBASIC14.93□□□□□ -0.02
CAPN1P07384 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.93□□□□□ -0.02
CAPN1P07384 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN1P07384 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CAPN1P07384 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.93□□□□□ -0.02
CAPN1P07384 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN1P07384 AC026748.1-201ENST00000624349 3251 ntBASIC14.93□□□□□ -0.02
CAPN1P07384 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN1P07384 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN1P07384 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN1P07384 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN1P07384 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CAPN1P07384 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN1P07384 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN1P07384 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN1P07384 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN1P07384 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN1P07384 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CAPN1P07384 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN1P07384 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms