Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL5A2P05997 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.29■□□□□ 0.68
COL5A2P05997 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL5A2P05997 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.29■□□□□ 0.68
COL5A2P05997 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL5A2P05997 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC19.29■□□□□ 0.68
COL5A2P05997 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC19.29■□□□□ 0.68
COL5A2P05997 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL5A2P05997 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL5A2P05997 WASH3P-207ENST00000560956 1394 ntBASIC19.29■□□□□ 0.68
COL5A2P05997 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL5A2P05997 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC19.28■□□□□ 0.68
COL5A2P05997 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC19.28■□□□□ 0.68
COL5A2P05997 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COL5A2P05997 CSNK1G2P1-201ENST00000442675 955 ntBASIC19.28■□□□□ 0.68
COL5A2P05997 RPL35P9-201ENST00000446059 350 ntBASIC19.28■□□□□ 0.68
COL5A2P05997 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC19.28■□□□□ 0.68
COL5A2P05997 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC19.28■□□□□ 0.68
COL5A2P05997 THY1-209ENST00000580275 578 ntTSL 3 BASIC19.28■□□□□ 0.68
COL5A2P05997 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC19.28■□□□□ 0.68
COL5A2P05997 AP001527.2-201ENST00000614441 631 ntBASIC19.28■□□□□ 0.68
COL5A2P05997 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL5A2P05997 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC19.28■□□□□ 0.68
COL5A2P05997 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC19.28■□□□□ 0.68
COL5A2P05997 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL5A2P05997 AC006372.4-201ENST00000624122 1543 ntBASIC19.28■□□□□ 0.68
COL5A2P05997 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL5A2P05997 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL5A2P05997 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL5A2P05997 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
COL5A2P05997 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC19.28■□□□□ 0.68
COL5A2P05997 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COL5A2P05997 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL5A2P05997 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC19.28■□□□□ 0.68
COL5A2P05997 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL5A2P05997 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COL5A2P05997 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL5A2P05997 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
COL5A2P05997 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC19.28■□□□□ 0.68
COL5A2P05997 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC19.28■□□□□ 0.68
COL5A2P05997 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COL5A2P05997 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC19.28■□□□□ 0.68
COL5A2P05997 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC19.28■□□□□ 0.68
COL5A2P05997 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COL5A2P05997 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.28■□□□□ 0.68
COL5A2P05997 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC19.28■□□□□ 0.68
COL5A2P05997 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL5A2P05997 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC19.27■□□□□ 0.68
COL5A2P05997 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL5A2P05997 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC19.27■□□□□ 0.68
COL5A2P05997 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC19.27■□□□□ 0.68
COL5A2P05997 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC19.27■□□□□ 0.68
COL5A2P05997 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL5A2P05997 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
COL5A2P05997 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL5A2P05997 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL5A2P05997 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC19.27■□□□□ 0.68
COL5A2P05997 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COL5A2P05997 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL5A2P05997 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC19.27■□□□□ 0.68
COL5A2P05997 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC19.27■□□□□ 0.68
COL5A2P05997 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COL5A2P05997 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL5A2P05997 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL5A2P05997 BRD7P5-201ENST00000299197 1822 ntBASIC19.27■□□□□ 0.68
COL5A2P05997 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL5A2P05997 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COL5A2P05997 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL5A2P05997 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL5A2P05997 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
COL5A2P05997 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
COL5A2P05997 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
COL5A2P05997 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
COL5A2P05997 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
COL5A2P05997 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
COL5A2P05997 AC108734.2-201ENST00000420887 1069 ntBASIC19.27■□□□□ 0.67
COL5A2P05997 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC19.27■□□□□ 0.67
COL5A2P05997 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC19.27■□□□□ 0.67
COL5A2P05997 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC19.27■□□□□ 0.67
COL5A2P05997 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC19.27■□□□□ 0.67
COL5A2P05997 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
COL5A2P05997 AC055811.3-201ENST00000584952 686 ntBASIC19.27■□□□□ 0.67
COL5A2P05997 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
COL5A2P05997 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC19.27■□□□□ 0.67
COL5A2P05997 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
COL5A2P05997 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC19.27■□□□□ 0.67
COL5A2P05997 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.67
COL5A2P05997 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
COL5A2P05997 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
COL5A2P05997 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
COL5A2P05997 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
COL5A2P05997 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL5A2P05997 AL672207.1-201ENST00000328462 1570 ntBASIC19.26■□□□□ 0.67
COL5A2P05997 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC19.26■□□□□ 0.67
COL5A2P05997 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL5A2P05997 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL5A2P05997 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
COL5A2P05997 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL5A2P05997 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL5A2P05997 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms