Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.37□□□□□ -0.27
KDM4BO94953 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KDM4BO94953 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KDM4BO94953 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.37□□□□□ -0.27
KDM4BO94953 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.37□□□□□ -0.27
KDM4BO94953 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KDM4BO94953 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
KDM4BO94953 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KDM4BO94953 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
KDM4BO94953 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KDM4BO94953 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
KDM4BO94953 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KDM4BO94953 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.37□□□□□ -0.27
KDM4BO94953 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KDM4BO94953 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KDM4BO94953 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.37□□□□□ -0.27
KDM4BO94953 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
KDM4BO94953 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
KDM4BO94953 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KDM4BO94953 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.37□□□□□ -0.27
KDM4BO94953 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KDM4BO94953 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KDM4BO94953 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
KDM4BO94953 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KDM4BO94953 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KDM4BO94953 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.36□□□□□ -0.27
KDM4BO94953 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KDM4BO94953 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KDM4BO94953 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KDM4BO94953 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.36□□□□□ -0.27
KDM4BO94953 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.36□□□□□ -0.27
KDM4BO94953 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KDM4BO94953 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
KDM4BO94953 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KDM4BO94953 CR383656.2-201ENST00000548656 2254 ntBASIC13.36□□□□□ -0.27
KDM4BO94953 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
KDM4BO94953 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.36□□□□□ -0.27
KDM4BO94953 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
KDM4BO94953 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KDM4BO94953 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.36□□□□□ -0.27
KDM4BO94953 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.36□□□□□ -0.27
KDM4BO94953 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.36□□□□□ -0.27
KDM4BO94953 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.36□□□□□ -0.27
KDM4BO94953 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.36□□□□□ -0.27
KDM4BO94953 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.36□□□□□ -0.27
KDM4BO94953 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.36□□□□□ -0.27
KDM4BO94953 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KDM4BO94953 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KDM4BO94953 RN7SL828P-201ENST00000607615 303 ntBASIC13.36□□□□□ -0.27
KDM4BO94953 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.36□□□□□ -0.27
KDM4BO94953 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KDM4BO94953 AL928921.2-201ENST00000641325 2442 ntBASIC13.36□□□□□ -0.27
KDM4BO94953 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
KDM4BO94953 AC018529.2-202ENST00000611482 3087 ntBASIC13.36□□□□□ -0.27
KDM4BO94953 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KDM4BO94953 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
KDM4BO94953 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KDM4BO94953 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
KDM4BO94953 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KDM4BO94953 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KDM4BO94953 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
KDM4BO94953 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
KDM4BO94953 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
KDM4BO94953 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KDM4BO94953 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.36□□□□□ -0.27
KDM4BO94953 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
KDM4BO94953 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KDM4BO94953 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KDM4BO94953 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
KDM4BO94953 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KDM4BO94953 AC084364.1-201ENST00000551967 1556 ntBASIC13.36□□□□□ -0.27
KDM4BO94953 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
KDM4BO94953 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
KDM4BO94953 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
KDM4BO94953 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.36□□□□□ -0.27
KDM4BO94953 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.36□□□□□ -0.27
KDM4BO94953 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KDM4BO94953 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.36□□□□□ -0.27
KDM4BO94953 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.36□□□□□ -0.27
KDM4BO94953 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
KDM4BO94953 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KDM4BO94953 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.35□□□□□ -0.27
KDM4BO94953 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
KDM4BO94953 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 KRT8P12-202ENST00000472924 1397 ntBASIC13.35□□□□□ -0.27
KDM4BO94953 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
KDM4BO94953 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
KDM4BO94953 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms