Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SSSCA1O60232 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSSCA1O60232 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.37□□□□□ -0.43
SSSCA1O60232 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSSCA1O60232 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.37□□□□□ -0.43
SSSCA1O60232 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSSCA1O60232 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.37□□□□□ -0.43
SSSCA1O60232 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SSSCA1O60232 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SSSCA1O60232 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
SSSCA1O60232 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SSSCA1O60232 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSSCA1O60232 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSSCA1O60232 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSSCA1O60232 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSSCA1O60232 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSSCA1O60232 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
SSSCA1O60232 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSSCA1O60232 AC007967.2-201ENST00000432613 625 ntBASIC12.37□□□□□ -0.43
SSSCA1O60232 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSSCA1O60232 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SSSCA1O60232 IGHV3-62-201ENST00000520057 340 ntBASIC12.37□□□□□ -0.43
SSSCA1O60232 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC12.37□□□□□ -0.43
SSSCA1O60232 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
SSSCA1O60232 CALM3-211ENST00000598871 561 ntTSL 4 BASIC12.37□□□□□ -0.43
SSSCA1O60232 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC12.37□□□□□ -0.43
SSSCA1O60232 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC12.37□□□□□ -0.43
SSSCA1O60232 AL513190.1-201ENST00000621254 727 ntBASIC12.37□□□□□ -0.43
SSSCA1O60232 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SSSCA1O60232 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.37□□□□□ -0.43
SSSCA1O60232 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SSSCA1O60232 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SSSCA1O60232 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SSSCA1O60232 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSSCA1O60232 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SSSCA1O60232 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SSSCA1O60232 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SSSCA1O60232 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSSCA1O60232 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSSCA1O60232 AC005562.1-201ENST00000583030 3219 ntBASIC12.37□□□□□ -0.43
SSSCA1O60232 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSSCA1O60232 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SSSCA1O60232 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSSCA1O60232 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSSCA1O60232 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSSCA1O60232 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.37□□□□□ -0.43
SSSCA1O60232 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.37□□□□□ -0.43
SSSCA1O60232 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SSSCA1O60232 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSSCA1O60232 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
SSSCA1O60232 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SSSCA1O60232 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SSSCA1O60232 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.37□□□□□ -0.43
SSSCA1O60232 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
SSSCA1O60232 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSSCA1O60232 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SSSCA1O60232 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSSCA1O60232 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SSSCA1O60232 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
SSSCA1O60232 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.36□□□□□ -0.43
SSSCA1O60232 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSSCA1O60232 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SSSCA1O60232 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
SSSCA1O60232 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.36□□□□□ -0.43
SSSCA1O60232 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SSSCA1O60232 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SSSCA1O60232 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.36□□□□□ -0.43
SSSCA1O60232 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.36□□□□□ -0.43
SSSCA1O60232 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.36□□□□□ -0.43
SSSCA1O60232 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSSCA1O60232 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSSCA1O60232 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SSSCA1O60232 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SSSCA1O60232 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.36□□□□□ -0.43
SSSCA1O60232 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SSSCA1O60232 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSSCA1O60232 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSSCA1O60232 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSSCA1O60232 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SSSCA1O60232 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSSCA1O60232 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SSSCA1O60232 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SSSCA1O60232 TCAF1P1-201ENST00000414990 2232 ntBASIC12.36□□□□□ -0.43
SSSCA1O60232 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SSSCA1O60232 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSSCA1O60232 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SSSCA1O60232 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
SSSCA1O60232 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSSCA1O60232 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSSCA1O60232 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC12.36□□□□□ -0.43
SSSCA1O60232 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC12.36□□□□□ -0.43
SSSCA1O60232 TARDBPP1-201ENST00000442013 1203 ntBASIC12.36□□□□□ -0.43
SSSCA1O60232 KRT18P2-201ENST00000447938 1258 ntBASIC12.36□□□□□ -0.43
SSSCA1O60232 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC12.36□□□□□ -0.43
SSSCA1O60232 PPIE-208ENST00000470213 927 ntTSL 3 BASIC12.36□□□□□ -0.43
SSSCA1O60232 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC12.36□□□□□ -0.43
SSSCA1O60232 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.36□□□□□ -0.43
SSSCA1O60232 INO80E-210ENST00000567705 880 ntTSL 3 BASIC12.36□□□□□ -0.43
SSSCA1O60232 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.36□□□□□ -0.43
SSSCA1O60232 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 529 ms