Protein–RNA interactions for Protein: O00192

ARVCF, Armadillo repeat protein deleted in velo-cardio-facial syndrome, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARVCFO00192 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ARVCFO00192 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.34■□□□□ 0.21
ARVCFO00192 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ARVCFO00192 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ARVCFO00192 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.34■□□□□ 0.21
ARVCFO00192 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ARVCFO00192 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ARVCFO00192 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.34■□□□□ 0.21
ARVCFO00192 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ARVCFO00192 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
ARVCFO00192 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.34■□□□□ 0.21
ARVCFO00192 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ARVCFO00192 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.33■□□□□ 0.21
ARVCFO00192 ZBED1P1-201ENST00000502364 1930 ntBASIC16.33■□□□□ 0.21
ARVCFO00192 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
ARVCFO00192 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ARVCFO00192 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
ARVCFO00192 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ARVCFO00192 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ARVCFO00192 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ARVCFO00192 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ARVCFO00192 XBP1P1-201ENST00000436573 652 ntBASIC16.33■□□□□ 0.2
ARVCFO00192 CHCHD2P9-201ENST00000461726 456 ntBASIC16.33■□□□□ 0.2
ARVCFO00192 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC16.33■□□□□ 0.2
ARVCFO00192 GCOM2-201ENST00000509133 1104 ntBASIC16.33■□□□□ 0.2
ARVCFO00192 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.33■□□□□ 0.2
ARVCFO00192 AC093752.3-201ENST00000567343 901 ntBASIC16.33■□□□□ 0.2
ARVCFO00192 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC16.33■□□□□ 0.2
ARVCFO00192 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC16.33■□□□□ 0.2
ARVCFO00192 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC16.33■□□□□ 0.2
ARVCFO00192 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.33■□□□□ 0.2
ARVCFO00192 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.33■□□□□ 0.2
ARVCFO00192 KRT18P9-201ENST00000604826 1300 ntBASIC16.33■□□□□ 0.2
ARVCFO00192 CICP6-201ENST00000457191 2729 ntBASIC16.33■□□□□ 0.2
ARVCFO00192 LINC02199-201ENST00000506655 2702 ntBASIC16.33■□□□□ 0.2
ARVCFO00192 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ARVCFO00192 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
ARVCFO00192 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ARVCFO00192 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ARVCFO00192 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ARVCFO00192 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ARVCFO00192 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
ARVCFO00192 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ARVCFO00192 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
ARVCFO00192 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ARVCFO00192 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ARVCFO00192 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
ARVCFO00192 AC090616.6-203ENST00000579186 1945 ntBASIC16.33■□□□□ 0.2
ARVCFO00192 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.33■□□□□ 0.2
ARVCFO00192 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.33■□□□□ 0.2
ARVCFO00192 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ARVCFO00192 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ARVCFO00192 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.33■□□□□ 0.2
ARVCFO00192 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ARVCFO00192 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ARVCFO00192 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ARVCFO00192 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ARVCFO00192 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ARVCFO00192 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.32■□□□□ 0.2
ARVCFO00192 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ARVCFO00192 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ARVCFO00192 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ARVCFO00192 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ARVCFO00192 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
ARVCFO00192 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ARVCFO00192 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.32■□□□□ 0.2
ARVCFO00192 MIR557-201ENST00000385239 98 ntBASIC16.32■□□□□ 0.2
ARVCFO00192 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.32■□□□□ 0.2
ARVCFO00192 BANF1P3-201ENST00000412556 261 ntBASIC16.32■□□□□ 0.2
ARVCFO00192 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ARVCFO00192 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ARVCFO00192 AC097065.1-201ENST00000425737 517 ntBASIC16.32■□□□□ 0.2
ARVCFO00192 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ARVCFO00192 AL627422.1-201ENST00000434104 580 ntBASIC16.32■□□□□ 0.2
ARVCFO00192 KRT18P66-201ENST00000452970 1269 ntBASIC16.32■□□□□ 0.2
ARVCFO00192 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ARVCFO00192 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC16.32■□□□□ 0.2
ARVCFO00192 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC16.32■□□□□ 0.2
ARVCFO00192 RBM8B-201ENST00000555532 525 ntBASIC16.32■□□□□ 0.2
ARVCFO00192 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ARVCFO00192 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
ARVCFO00192 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
ARVCFO00192 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ARVCFO00192 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.32■□□□□ 0.2
ARVCFO00192 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.32■□□□□ 0.2
ARVCFO00192 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.32■□□□□ 0.2
ARVCFO00192 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ARVCFO00192 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC16.32■□□□□ 0.2
ARVCFO00192 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.32■□□□□ 0.2
ARVCFO00192 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ARVCFO00192 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ARVCFO00192 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ARVCFO00192 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ARVCFO00192 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ARVCFO00192 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.31■□□□□ 0.2
ARVCFO00192 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.31■□□□□ 0.2
ARVCFO00192 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ARVCFO00192 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.31■□□□□ 0.2
ARVCFO00192 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC16.31■□□□□ 0.2
ARVCFO00192 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms