Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.18□□□□□ -0.46
SRRM4A7MD48 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SRRM4A7MD48 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SRRM4A7MD48 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.18□□□□□ -0.46
SRRM4A7MD48 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SRRM4A7MD48 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SRRM4A7MD48 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.18□□□□□ -0.46
SRRM4A7MD48 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SRRM4A7MD48 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
SRRM4A7MD48 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SRRM4A7MD48 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
SRRM4A7MD48 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
SRRM4A7MD48 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SRRM4A7MD48 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SRRM4A7MD48 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SRRM4A7MD48 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SRRM4A7MD48 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SRRM4A7MD48 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SRRM4A7MD48 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SRRM4A7MD48 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.18□□□□□ -0.46
SRRM4A7MD48 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SRRM4A7MD48 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.18□□□□□ -0.46
SRRM4A7MD48 AC018665.1-201ENST00000622927 1362 ntBASIC12.18□□□□□ -0.46
SRRM4A7MD48 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SRRM4A7MD48 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
SRRM4A7MD48 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SRRM4A7MD48 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.17□□□□□ -0.46
SRRM4A7MD48 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.17□□□□□ -0.46
SRRM4A7MD48 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
SRRM4A7MD48 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SRRM4A7MD48 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.17□□□□□ -0.46
SRRM4A7MD48 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.17□□□□□ -0.46
SRRM4A7MD48 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SRRM4A7MD48 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SRRM4A7MD48 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SRRM4A7MD48 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC12.17□□□□□ -0.46
SRRM4A7MD48 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SRRM4A7MD48 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SRRM4A7MD48 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
SRRM4A7MD48 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SRRM4A7MD48 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SRRM4A7MD48 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SRRM4A7MD48 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
SRRM4A7MD48 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SRRM4A7MD48 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SRRM4A7MD48 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.17□□□□□ -0.46
SRRM4A7MD48 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SRRM4A7MD48 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SRRM4A7MD48 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SRRM4A7MD48 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SRRM4A7MD48 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SRRM4A7MD48 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SRRM4A7MD48 MIR770-201ENST00000390219 98 ntBASIC12.17□□□□□ -0.46
SRRM4A7MD48 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SRRM4A7MD48 C1QBPP1-201ENST00000400117 770 ntBASIC12.17□□□□□ -0.46
SRRM4A7MD48 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC12.17□□□□□ -0.46
SRRM4A7MD48 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC12.17□□□□□ -0.46
SRRM4A7MD48 AC092552.1-201ENST00000547243 906 ntBASIC12.17□□□□□ -0.46
SRRM4A7MD48 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.17□□□□□ -0.46
SRRM4A7MD48 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC12.17□□□□□ -0.46
SRRM4A7MD48 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.17□□□□□ -0.46
SRRM4A7MD48 AL359711.2-201ENST00000563105 872 ntBASIC12.17□□□□□ -0.46
SRRM4A7MD48 AC027796.2-201ENST00000575326 344 ntBASIC12.17□□□□□ -0.46
SRRM4A7MD48 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.17□□□□□ -0.46
SRRM4A7MD48 AC093726.1-201ENST00000608064 963 ntBASIC12.17□□□□□ -0.46
SRRM4A7MD48 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.17□□□□□ -0.46
SRRM4A7MD48 AC007431.3-201ENST00000623221 587 ntBASIC12.17□□□□□ -0.46
SRRM4A7MD48 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.17□□□□□ -0.46
SRRM4A7MD48 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SRRM4A7MD48 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
SRRM4A7MD48 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SRRM4A7MD48 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SRRM4A7MD48 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SRRM4A7MD48 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SRRM4A7MD48 OR2I1P-210ENST00000642037 4691 ntBASIC12.17□□□□□ -0.46
SRRM4A7MD48 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SRRM4A7MD48 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SRRM4A7MD48 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SRRM4A7MD48 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
SRRM4A7MD48 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.17□□□□□ -0.46
SRRM4A7MD48 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SRRM4A7MD48 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SRRM4A7MD48 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.16□□□□□ -0.46
SRRM4A7MD48 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SRRM4A7MD48 LINC01230-201ENST00000625222 3017 ntBASIC12.16□□□□□ -0.46
SRRM4A7MD48 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SRRM4A7MD48 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.16□□□□□ -0.46
SRRM4A7MD48 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SRRM4A7MD48 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SRRM4A7MD48 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.16□□□□□ -0.46
SRRM4A7MD48 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SRRM4A7MD48 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
SRRM4A7MD48 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SRRM4A7MD48 AC007541.1-201ENST00000570282 1469 ntBASIC12.16□□□□□ -0.46
SRRM4A7MD48 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SRRM4A7MD48 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SRRM4A7MD48 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
SRRM4A7MD48 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SRRM4A7MD48 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.16□□□□□ -0.46
SRRM4A7MD48 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms