Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 AC023090.2-201ENST00000625182 2110 ntBASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 AC232323.1-201ENST00000540724 2099 ntBASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 AL162726.2-201ENST00000438986 1017 ntBASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 DUX4L47-201ENST00000566374 394 ntBASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 AP001063.1-201ENST00000568332 529 ntBASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 AC138761.1-201ENST00000584393 385 ntBASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 AP005019.2-201ENST00000615104 511 ntBASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 AL033527.5-201ENST00000641382 801 ntBASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CCDC162PA2VCL2 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 AC093433.1-201ENST00000458048 571 ntBASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 AC022616.1-201ENST00000518688 554 ntBASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms