Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.44■□□□□ 0.38
R3HCC1Q9Y3T6 RN7SL828P-201ENST00000607615 303 ntBASIC17.44■□□□□ 0.38
R3HCC1Q9Y3T6 AL589739.1-201ENST00000607720 493 ntBASIC17.44■□□□□ 0.38
R3HCC1Q9Y3T6 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
R3HCC1Q9Y3T6 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
R3HCC1Q9Y3T6 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
R3HCC1Q9Y3T6 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
R3HCC1Q9Y3T6 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
R3HCC1Q9Y3T6 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC17.44■□□□□ 0.38
R3HCC1Q9Y3T6 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
R3HCC1Q9Y3T6 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
R3HCC1Q9Y3T6 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
R3HCC1Q9Y3T6 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
R3HCC1Q9Y3T6 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
R3HCC1Q9Y3T6 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
R3HCC1Q9Y3T6 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
R3HCC1Q9Y3T6 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
R3HCC1Q9Y3T6 AL359881.3-201ENST00000602640 1721 ntBASIC17.44■□□□□ 0.38
R3HCC1Q9Y3T6 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
R3HCC1Q9Y3T6 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
R3HCC1Q9Y3T6 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
R3HCC1Q9Y3T6 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
R3HCC1Q9Y3T6 CETN4P-206ENST00000642099 2168 ntBASIC17.43■□□□□ 0.38
R3HCC1Q9Y3T6 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC17.43■□□□□ 0.38
R3HCC1Q9Y3T6 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
R3HCC1Q9Y3T6 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
R3HCC1Q9Y3T6 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
R3HCC1Q9Y3T6 ZBED1P1-201ENST00000502364 1930 ntBASIC17.43■□□□□ 0.38
R3HCC1Q9Y3T6 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
R3HCC1Q9Y3T6 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
R3HCC1Q9Y3T6 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.43■□□□□ 0.38
R3HCC1Q9Y3T6 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
R3HCC1Q9Y3T6 NIN-202ENST00000324330 4364 ntTSL 5 BASIC17.43■□□□□ 0.38
R3HCC1Q9Y3T6 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
R3HCC1Q9Y3T6 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
R3HCC1Q9Y3T6 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
R3HCC1Q9Y3T6 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
R3HCC1Q9Y3T6 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.43■□□□□ 0.38
R3HCC1Q9Y3T6 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.43■□□□□ 0.38
R3HCC1Q9Y3T6 AC243562.2-201ENST00000561247 970 ntBASIC17.43■□□□□ 0.38
R3HCC1Q9Y3T6 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.43■□□□□ 0.38
R3HCC1Q9Y3T6 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.43■□□□□ 0.38
R3HCC1Q9Y3T6 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
R3HCC1Q9Y3T6 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
R3HCC1Q9Y3T6 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
R3HCC1Q9Y3T6 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
R3HCC1Q9Y3T6 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
R3HCC1Q9Y3T6 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
R3HCC1Q9Y3T6 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
R3HCC1Q9Y3T6 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
R3HCC1Q9Y3T6 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
R3HCC1Q9Y3T6 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.43■□□□□ 0.38
R3HCC1Q9Y3T6 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
R3HCC1Q9Y3T6 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
R3HCC1Q9Y3T6 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.43■□□□□ 0.38
R3HCC1Q9Y3T6 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
R3HCC1Q9Y3T6 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
R3HCC1Q9Y3T6 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
R3HCC1Q9Y3T6 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
R3HCC1Q9Y3T6 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
R3HCC1Q9Y3T6 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
R3HCC1Q9Y3T6 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
R3HCC1Q9Y3T6 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.42■□□□□ 0.38
R3HCC1Q9Y3T6 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
R3HCC1Q9Y3T6 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
R3HCC1Q9Y3T6 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
R3HCC1Q9Y3T6 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
R3HCC1Q9Y3T6 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
R3HCC1Q9Y3T6 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.42■□□□□ 0.38
R3HCC1Q9Y3T6 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
R3HCC1Q9Y3T6 CYMP-203ENST00000474680 1263 ntBASIC17.42■□□□□ 0.38
R3HCC1Q9Y3T6 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.42■□□□□ 0.38
R3HCC1Q9Y3T6 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.42■□□□□ 0.38
R3HCC1Q9Y3T6 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.42■□□□□ 0.38
R3HCC1Q9Y3T6 AC051619.7-201ENST00000568314 623 ntBASIC17.42■□□□□ 0.38
R3HCC1Q9Y3T6 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC17.42■□□□□ 0.38
R3HCC1Q9Y3T6 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
R3HCC1Q9Y3T6 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
R3HCC1Q9Y3T6 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
R3HCC1Q9Y3T6 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC17.42■□□□□ 0.38
R3HCC1Q9Y3T6 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
R3HCC1Q9Y3T6 AC019294.4-201ENST00000561777 2905 ntBASIC17.42■□□□□ 0.38
R3HCC1Q9Y3T6 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
R3HCC1Q9Y3T6 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
R3HCC1Q9Y3T6 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
R3HCC1Q9Y3T6 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC17.42■□□□□ 0.38
R3HCC1Q9Y3T6 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
R3HCC1Q9Y3T6 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC17.42■□□□□ 0.38
R3HCC1Q9Y3T6 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.42■□□□□ 0.38
R3HCC1Q9Y3T6 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
R3HCC1Q9Y3T6 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC17.42■□□□□ 0.38
R3HCC1Q9Y3T6 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
R3HCC1Q9Y3T6 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
R3HCC1Q9Y3T6 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms