Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC5.91□□□□□ -1.46
MACF1Q9UPN3 AC011773.4-202ENST00000566000 1264 ntBASIC5.91□□□□□ -1.46
MACF1Q9UPN3 AC010524.1-201ENST00000596488 494 ntTSL 3 BASIC5.91□□□□□ -1.46
MACF1Q9UPN3 AL356740.1-201ENST00000602192 1297 ntBASIC5.91□□□□□ -1.46
MACF1Q9UPN3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
MACF1Q9UPN3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
MACF1Q9UPN3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
MACF1Q9UPN3 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 PTS-204ENST00000525803 625 ntTSL 3 BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 RPSAP67-201ENST00000584105 862 ntBASIC5.9□□□□□ -1.46
MACF1Q9UPN3 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 TNFSF13-209ENST00000625791 955 ntTSL 2 BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 ETV7-208ENST00000627426 1285 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 HRASLS2-201ENST00000255695 742 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 FAM230B-204ENST00000421576 598 ntTSL 5 BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 AC118758.1-201ENST00000448242 564 ntTSL 4 BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 RN7SKP155-201ENST00000516031 288 ntBASIC5.9□□□□□ -1.46
MACF1Q9UPN3 KRT8P1-201ENST00000557533 1207 ntBASIC5.9□□□□□ -1.46
MACF1Q9UPN3 BMF-209ENST00000561282 747 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 AC116914.2-201ENST00000571741 291 ntTSL 5 BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 AC010325.1-203ENST00000636757 380 ntAPPRIS P5 TSL 5 BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 BIN3-212ENST00000640731 450 ntTSL 5 BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 AC103702.1-201ENST00000548801 2630 ntBASIC5.9□□□□□ -1.46
MACF1Q9UPN3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 AL356583.1-201ENST00000398739 1371 ntBASIC5.9□□□□□ -1.46
MACF1Q9UPN3 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 MYL2-201ENST00000228841 807 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 SERPINB8P1-201ENST00000401898 377 ntBASIC5.9□□□□□ -1.46
MACF1Q9UPN3 AL137077.1-201ENST00000442115 528 ntBASIC5.9□□□□□ -1.46
MACF1Q9UPN3 RN7SL677P-201ENST00000466970 319 ntBASIC5.9□□□□□ -1.46
MACF1Q9UPN3 SNORD3B-1-201ENST00000577988 758 ntBASIC5.9□□□□□ -1.46
MACF1Q9UPN3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
MACF1Q9UPN3 AC016396.2-201ENST00000562575 1417 ntBASIC5.9□□□□□ -1.47
MACF1Q9UPN3 AL365181.1-201ENST00000564032 1828 ntBASIC5.9□□□□□ -1.47
MACF1Q9UPN3 FAM96A-202ENST00000380290 826 ntTSL 2 BASIC5.9□□□□□ -1.47
MACF1Q9UPN3 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
MACF1Q9UPN3 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
MACF1Q9UPN3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
MACF1Q9UPN3 CROCCP2-202ENST00000412962 2773 ntBASIC5.9□□□□□ -1.47
MACF1Q9UPN3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
MACF1Q9UPN3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
MACF1Q9UPN3 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.47
MACF1Q9UPN3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
MACF1Q9UPN3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
MACF1Q9UPN3 FAS-202ENST00000352159 1722 ntTSL 5 BASIC5.9□□□□□ -1.47
MACF1Q9UPN3 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC5.9□□□□□ -1.47
MACF1Q9UPN3 IFT43-202ENST00000314067 833 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
MACF1Q9UPN3 OR2A15P-201ENST00000463814 900 ntBASIC5.9□□□□□ -1.47
MACF1Q9UPN3 AC104123.1-201ENST00000502645 473 ntTSL 5 BASIC5.9□□□□□ -1.47
MACF1Q9UPN3 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
MACF1Q9UPN3 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC5.9□□□□□ -1.47
MACF1Q9UPN3 POLR2J2-203ENST00000476151 1598 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
MACF1Q9UPN3 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
MACF1Q9UPN3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
MACF1Q9UPN3 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC5.9□□□□□ -1.47
MACF1Q9UPN3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
MACF1Q9UPN3 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
MACF1Q9UPN3 RPL10P12-201ENST00000427342 318 ntBASIC5.9□□□□□ -1.47
MACF1Q9UPN3 ACTG1P23-201ENST00000437653 1074 ntBASIC5.9□□□□□ -1.47
MACF1Q9UPN3 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
MACF1Q9UPN3 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC5.9□□□□□ -1.47
MACF1Q9UPN3 RN7SL5P-201ENST00000581458 321 ntBASIC5.9□□□□□ -1.47
MACF1Q9UPN3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.47
MACF1Q9UPN3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
MACF1Q9UPN3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
MACF1Q9UPN3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC5.89□□□□□ -1.47
MACF1Q9UPN3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC5.89□□□□□ -1.47
MACF1Q9UPN3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
MACF1Q9UPN3 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms