Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 AL139400.1-201ENST00000366220 510 ntBASIC14.3□□□□□ -0.12
VAPAQ9P0L0 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 AC125807.1-201ENST00000483097 614 ntBASIC14.3□□□□□ -0.12
VAPAQ9P0L0 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 AC069120.2-201ENST00000524091 540 ntBASIC14.3□□□□□ -0.12
VAPAQ9P0L0 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 AL391069.4-201ENST00000609583 481 ntBASIC14.3□□□□□ -0.12
VAPAQ9P0L0 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 CLK3P2-201ENST00000427566 1453 ntBASIC14.3□□□□□ -0.12
VAPAQ9P0L0 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VAPAQ9P0L0 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 AC092580.3-201ENST00000430932 139 ntBASIC14.29□□□□□ -0.12
VAPAQ9P0L0 AL353779.1-201ENST00000434793 351 ntBASIC14.29□□□□□ -0.12
VAPAQ9P0L0 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 AC114501.2-201ENST00000439631 535 ntBASIC14.29□□□□□ -0.12
VAPAQ9P0L0 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 CNN2P2-201ENST00000443536 909 ntBASIC14.29□□□□□ -0.12
VAPAQ9P0L0 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 CNN2P3-201ENST00000450201 906 ntBASIC14.29□□□□□ -0.12
VAPAQ9P0L0 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms