Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 CAMTA2-201ENST00000348066 4491 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 BCOR-202ENST00000378444 6358 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 AC009549.1-201ENST00000603468 1686 ntBASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 BRD2-205ENST00000449085 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 BIVM-201ENST00000257336 3859 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 SERINC4-201ENST00000299969 2318 ntTSL 5 BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 PUM3-202ENST00000397885 2321 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 NLRP2-206ENST00000427260 3411 ntTSL 2 BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 MICAL2-203ENST00000379612 6625 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 ZNF621-201ENST00000310898 2404 ntTSL 2 BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 SOCS6-201ENST00000397942 5848 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 PNPLA6-220ENST00000600737 4195 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 UEVLD-213ENST00000543987 2503 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 CDC42BPA-202ENST00000366764 10445 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 KRT8P49-201ENST00000604166 1432 ntBASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 MPP7-202ENST00000375719 2090 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 COBLL1-202ENST00000375458 9367 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 IL36RN-202ENST00000393200 2700 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 AC015818.9-201ENST00000591705 4582 ntBASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 FOSB-204ENST00000585836 3550 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 RHD-210ENST00000622561 3007 ntTSL 5 BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 KLF17-201ENST00000372299 3131 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 Z97192.1-201ENST00000391625 3894 ntTSL 2 BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 GEMIN4-207ENST00000576778 4729 ntBASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 ASTN1-203ENST00000367657 4187 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 ACSM5-201ENST00000331849 2796 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 EDRF1-201ENST00000337623 4387 ntAPPRIS P3 TSL 5 BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 C2orf69-201ENST00000319974 3728 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 SNX3-202ENST00000349379 890 ntTSL 2 BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 MYADML-201ENST00000474610 2147 ntBASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 IGHV3-52-201ENST00000519770 353 ntBASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 EHF-205ENST00000527935 557 ntTSL 2 BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 KRT125P-201ENST00000546827 989 ntBASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 AC005332.3-201ENST00000589904 676 ntBASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 AC011298.3-201ENST00000615796 283 ntBASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 HLA-A-209ENST00000638375 975 ntBASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 VWDE-201ENST00000275358 5260 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 AGPAT3-203ENST00000398058 4338 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 CORO7-202ENST00000537233 3392 ntTSL 2 BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 MCM5-202ENST00000382011 2402 ntTSL 2 BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 CTBP1-AS2-202ENST00000505364 2423 ntTSL 2 BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 PCDHGB2-201ENST00000522605 4602 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 ZNF630-206ENST00000442455 2829 ntAPPRIS P2 TSL 4 BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 FNBP4-201ENST00000263773 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 ZNF133-215ENST00000630056 1999 ntTSL 2 BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 VDR-202ENST00000395324 4762 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 DPF2-202ENST00000415073 2085 ntTSL 2 BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 AP003969.2-201ENST00000623739 2275 ntBASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 FLII-221ENST00000578558 2377 ntTSL 5 BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 SHPRH-211ENST00000629427 7338 ntAPPRIS ALT1 TSL 5 BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 IQGAP3-201ENST00000361170 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 SDCCAG8-201ENST00000366541 2567 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 GAS7-201ENST00000323816 8033 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 GAS7-204ENST00000437099 8003 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 OTUD6B-206ENST00000617869 3294 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDC42SE1Q9NRR8 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC7.52□□□□□ -1.2
CDC42SE1Q9NRR8 NPEPPS-201ENST00000322157 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
CDC42SE1Q9NRR8 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms