Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC7.77□□□□□ -1.16
KRTAP3-1Q9BYR8 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.16
KRTAP3-1Q9BYR8 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC7.77□□□□□ -1.16
KRTAP3-1Q9BYR8 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
KRTAP3-1Q9BYR8 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.16
KRTAP3-1Q9BYR8 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.16
KRTAP3-1Q9BYR8 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 AC055811.4-201ENST00000624039 1754 ntBASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 TP73-209ENST00000603362 1668 ntTSL 5 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 AL353705.2-201ENST00000428243 662 ntBASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 AC006355.1-201ENST00000440982 1012 ntBASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 TPT1P11-201ENST00000458482 498 ntBASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 AC010460.2-201ENST00000509054 677 ntBASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 SLED1-202ENST00000512051 380 ntBASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 MTND4LP31-201ENST00000514859 294 ntBASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 ALG1L8P-201ENST00000533887 760 ntBASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 MEG8-208ENST00000553465 1176 ntTSL 5 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 LITAF-210ENST00000571976 548 ntTSL 2 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 LITAF-214ENST00000574703 486 ntTSL 2 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 RN7SL828P-201ENST00000607615 303 ntBASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 AC112503.2-201ENST00000609005 552 ntBASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 AC023090.2-201ENST00000625182 2110 ntBASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 AC091948.2-201ENST00000636510 279 ntBASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 AC107918.4-201ENST00000641966 3141 ntBASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 Z97205.2-201ENST00000564697 1639 ntBASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
KRTAP3-1Q9BYR8 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms