RNA–Protein interactions for RNA: ENST00000546725.1

LINC00615-201, long intergenic non-protein coding RNA 615, humanhuman

TSL 2 BASIC

Gene LINC00615, Length 1,406 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00615-201ENST00000546725 AEBP2Q6ZN18 517 aaPredicted RBP31.76■■■□□ 2.68
LINC00615-201ENST00000546725 CHIC1Q5VXU3 224 aa30.96■■■□□ 2.55
LINC00615-201ENST00000546725 PHF23Q9BUL5 403 aaPredicted RBP27.16■■□□□ 1.94
LINC00615-201ENST00000546725 SENP3Q9H4L4 574 aaPredicted RBP27.09■■□□□ 1.93
LINC00615-201ENST00000546725 PLPPR3Q6T4P5 718 aa25.12■■□□□ 1.61
LINC00615-201ENST00000546725 FOXD1Q16676 465 aa25.09■■□□□ 1.61
LINC00615-201ENST00000546725 PPP6R1Q9UPN7 881 aa24.01■■□□□ 1.43
LINC00615-201ENST00000546725 ADRA2BP18089 450 aa24■■□□□ 1.43
LINC00615-201ENST00000546725 PIAS4Q8N2W9 510 aaPredicted RBP23.67■■□□□ 1.38
LINC00615-201ENST00000546725 MSH5O43196 834 aa23.28■■□□□ 1.32
LINC00615-201ENST00000546725 SCAF1Q9H7N4 1312 aaKnown RBP22.09■■□□□ 1.13
LINC00615-201ENST00000546725 PPP4R3CPQ6ZMV5 832 aa22.09■■□□□ 1.13
LINC00615-201ENST00000546725 MAPK8IP2Q13387 824 aaPredicted RBP21.8■■□□□ 1.08
LINC00615-201ENST00000546725 DMRT2Q9Y5R5 561 aa21.57■■□□□ 1.04
LINC00615-201ENST00000546725 NCBP3Q53F19 620 aaKnown RBP21.55■■□□□ 1.04
LINC00615-201ENST00000546725 CNKSR2Q8WXI2 1034 aa21.54■■□□□ 1.04
LINC00615-201ENST00000546725 KCNA4P22459 653 aa21.38■■□□□ 1.01
LINC00615-201ENST00000546725 POTEDQ86YR6 584 aa21.37■■□□□ 1.01
LINC00615-201ENST00000546725 NPM3O75607 178 aaKnown RBP21.13■□□□□ 0.97
LINC00615-201ENST00000546725 RNF216Q9NWF9 866 aaPredicted RBP21.13■□□□□ 0.97
LINC00615-201ENST00000546725 HOXD11P31277 338 aaPredicted RBP21.07■□□□□ 0.96
LINC00615-201ENST00000546725 DCAF8L1A6NGE4 600 aa20.68■□□□□ 0.9
LINC00615-201ENST00000546725 DNAJC5BQ9UF47 199 aa20.57■□□□□ 0.88
LINC00615-201ENST00000546725 SLC4A1APQ9BWU0 796 aaKnown RBP20.38■□□□□ 0.85
LINC00615-201ENST00000546725 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.12■□□□□ 0.81
LINC00615-201ENST00000546725 SLC4A2P04920 1241 aa19.96■□□□□ 0.79
LINC00615-201ENST00000546725 RNF39Q9H2S5 420 aa19.87■□□□□ 0.77
LINC00615-201ENST00000546725 FOXD4L1Q9NU39 408 aa19.76■□□□□ 0.75
LINC00615-201ENST00000546725 U3KPZ7 1027 aaPredicted RBP19.71■□□□□ 0.75
LINC00615-201ENST00000546725 C1QBPQ07021 282 aaKnown RBP19.68■□□□□ 0.74
LINC00615-201ENST00000546725 ZBTB22O15209 634 aa19.61■□□□□ 0.73
LINC00615-201ENST00000546725 EHMT2Q96KQ7 1210 aa19.59■□□□□ 0.73
LINC00615-201ENST00000546725 MYCNP04198 464 aaPredicted RBP19.58■□□□□ 0.72
LINC00615-201ENST00000546725 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.53■□□□□ 0.72
LINC00615-201ENST00000546725 HNRNPUL2Q1KMD3 747 aaKnown RBP19.53■□□□□ 0.72
LINC00615-201ENST00000546725 CACNB1Q02641 598 aaPredicted RBP19.51■□□□□ 0.71
LINC00615-201ENST00000546725 SAMD1Q6SPF0 538 aaPredicted RBP19.43■□□□□ 0.7
LINC00615-201ENST00000546725 CSRNP3Q8WYN3 585 aa19.43■□□□□ 0.7
LINC00615-201ENST00000546725 APLP2Q06481 763 aa19.4■□□□□ 0.7
LINC00615-201ENST00000546725 SPINK5Q9NQ38 1064 aaPredicted RBP19.19■□□□□ 0.66
LINC00615-201ENST00000546725 CAPN15O75808 1086 aa19.18■□□□□ 0.66
LINC00615-201ENST00000546725 ATXN8OSP0DMR3 200 aa19.13■□□□□ 0.65
LINC00615-201ENST00000546725 ZNF219Q9P2Y4 722 aaPredicted RBP19.08■□□□□ 0.64
LINC00615-201ENST00000546725 TRHP20396 242 aaPredicted RBP19.06■□□□□ 0.64
LINC00615-201ENST00000546725 ATF5Q9Y2D1 282 aaPredicted RBP18.97■□□□□ 0.63
LINC00615-201ENST00000546725 DSG3P32926 999 aa18.86■□□□□ 0.61
LINC00615-201ENST00000546725 ABCB7O75027 752 aa18.76■□□□□ 0.59
LINC00615-201ENST00000546725 POLA2Q14181 598 aa18.71■□□□□ 0.59
LINC00615-201ENST00000546725 ZBTB12Q9Y330 459 aaPredicted RBP18.46■□□□□ 0.55
LINC00615-201ENST00000546725 FBLN2P98095 1184 aa18.32■□□□□ 0.52
LINC00615-201ENST00000546725 MKRN4PQ13434 485 aaPredicted RBP18.15■□□□□ 0.5
LINC00615-201ENST00000546725 RBM42Q9BTD8 480 aaKnown RBP18.06■□□□□ 0.48
LINC00615-201ENST00000546725 OSCARQ8IYS5 282 aa18.04■□□□□ 0.48
LINC00615-201ENST00000546725 SPDYE2BA6NHP3 402 aa17.91■□□□□ 0.46
LINC00615-201ENST00000546725 SPDYE6P0CI01 402 aa17.91■□□□□ 0.46
LINC00615-201ENST00000546725 SPDYE2Q495Y8 402 aa17.91■□□□□ 0.46
LINC00615-201ENST00000546725 ZNF692Q9BU19 519 aaPredicted RBP17.82■□□□□ 0.44
LINC00615-201ENST00000546725 AKT1S1Q96B36 256 aa17.79■□□□□ 0.44
LINC00615-201ENST00000546725 SPDYE4A6NLX3 237 aa17.75■□□□□ 0.43
LINC00615-201ENST00000546725 SSUH2Q9Y2M2 353 aa17.71■□□□□ 0.43
LINC00615-201ENST00000546725 FKBP8Q14318 412 aa17.62■□□□□ 0.41
LINC00615-201ENST00000546725 REM2Q8IYK8 340 aaPredicted RBP17.57■□□□□ 0.4
LINC00615-201ENST00000546725 PABPN1Q86U42 306 aaKnown RBP eCLIP17.55■□□□□ 0.4
LINC00615-201ENST00000546725 SPDYE1Q8NFV5 336 aaPredicted RBP17.43■□□□□ 0.38
LINC00615-201ENST00000546725 PROM2Q8N271 834 aa17.38■□□□□ 0.37
LINC00615-201ENST00000546725 PITPNM1O00562 1244 aa17.35■□□□□ 0.37
LINC00615-201ENST00000546725 CLEC11AQ9Y240 323 aa17.34■□□□□ 0.37
LINC00615-201ENST00000546725 STAG3Q9UJ98 1225 aa17.31■□□□□ 0.36
LINC00615-201ENST00000546725 CHRDL2Q6WN34 429 aa17.3■□□□□ 0.36
LINC00615-201ENST00000546725 PRR29P0C7W0 189 aa17.19■□□□□ 0.34
LINC00615-201ENST00000546725 FBXO3Q9UK99 471 aa17.12■□□□□ 0.33
LINC00615-201ENST00000546725 FXR2P51116 673 aaKnown RBP eCLIP17.08■□□□□ 0.32
LINC00615-201ENST00000546725 PIP4P2Q8N4L2 257 aa17.04■□□□□ 0.32
LINC00615-201ENST00000546725 PRKAR2AP13861 404 aaKnown RBP16.95■□□□□ 0.3
LINC00615-201ENST00000546725 POTEHQ6S545 545 aa16.92■□□□□ 0.3
LINC00615-201ENST00000546725 PLEKHG5O94827 1062 aa16.88■□□□□ 0.29
LINC00615-201ENST00000546725 MIER1Q8N108 512 aa16.88■□□□□ 0.29
LINC00615-201ENST00000546725 CHADLQ6NUI6 762 aa16.87■□□□□ 0.29
LINC00615-201ENST00000546725 CREBZFQ9NS37 354 aa16.87■□□□□ 0.29
LINC00615-201ENST00000546725 PLCD3Q8N3E9 789 aa16.85■□□□□ 0.29
LINC00615-201ENST00000546725 VASPP50552 380 aaPredicted RBP16.8■□□□□ 0.28
LINC00615-201ENST00000546725 FARP1Q9Y4F1 1045 aaPredicted RBP16.75■□□□□ 0.27
LINC00615-201ENST00000546725 ZBTB47Q9UFB7 747 aaPredicted RBP16.71■□□□□ 0.27
LINC00615-201ENST00000546725 NPM1P06748 294 aaKnown RBP eCLIP16.69■□□□□ 0.26
LINC00615-201ENST00000546725 MNX1P50219 401 aaPredicted RBP16.64■□□□□ 0.25
LINC00615-201ENST00000546725 KLHL34Q8N239 644 aa16.61■□□□□ 0.25
LINC00615-201ENST00000546725 HAX1O00165 279 aa16.58■□□□□ 0.24
LINC00615-201ENST00000546725 IFNLR1Q8IU57 520 aaPredicted RBP16.53■□□□□ 0.24
LINC00615-201ENST00000546725 C19orf67A6NJJ6 358 aa16.5■□□□□ 0.23
LINC00615-201ENST00000546725 CD44P16070 742 aaKnown RBP16.45■□□□□ 0.22
LINC00615-201ENST00000546725 PAK3O75914 559 aaPredicted RBP16.45■□□□□ 0.22
LINC00615-201ENST00000546725 SPOCK2Q92563 424 aa16.43■□□□□ 0.22
LINC00615-201ENST00000546725 NUBP1P53384 320 aa16.4■□□□□ 0.22
LINC00615-201ENST00000546725 RASEFQ8IZ41 740 aa16.35■□□□□ 0.21
LINC00615-201ENST00000546725 TSPYL2Q9H2G4 693 aaPredicted RBP16.35■□□□□ 0.21
LINC00615-201ENST00000546725 ZRANB1Q9UGI0 708 aa16.35■□□□□ 0.21
LINC00615-201ENST00000546725 FAM212AQ96EL1 285 aa16.34■□□□□ 0.21
LINC00615-201ENST00000546725 EVX2Q03828 476 aa16.33■□□□□ 0.2
LINC00615-201ENST00000546725 DCAF8Q5TAQ9 597 aa16.29■□□□□ 0.2
LINC00615-201ENST00000546725 GSE1Q14687 1217 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms