Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PCGF1Q9BSM1 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PCGF1Q9BSM1 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PCGF1Q9BSM1 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PCGF1Q9BSM1 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 AC234783.1-201ENST00000441761 496 ntBASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 ATP5G2P4-201ENST00000442175 420 ntBASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 FUZ-207ENST00000526575 482 ntTSL 4 BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 AC008735.3-201ENST00000596646 500 ntBASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 AC000095.1-201ENST00000603208 874 ntBASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 AL359183.1-201ENST00000623796 2132 ntBASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
PCGF1Q9BSM1 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms