Protein–RNA interactions for Protein: Q9BQJ4

TMEM47, Transmembrane protein 47, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47Q9BQJ4 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM47Q9BQJ4 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM47Q9BQJ4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM47Q9BQJ4 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM47Q9BQJ4 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM47Q9BQJ4 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM47Q9BQJ4 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM47Q9BQJ4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM47Q9BQJ4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM47Q9BQJ4 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM47Q9BQJ4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM47Q9BQJ4 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM47Q9BQJ4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM47Q9BQJ4 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TMEM47Q9BQJ4 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM47Q9BQJ4 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM47Q9BQJ4 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM47Q9BQJ4 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM47Q9BQJ4 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
TMEM47Q9BQJ4 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM47Q9BQJ4 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.44■□□□□ 0.38
TMEM47Q9BQJ4 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM47Q9BQJ4 AC131206.1-201ENST00000538078 1211 ntBASIC17.44■□□□□ 0.38
TMEM47Q9BQJ4 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.44■□□□□ 0.38
TMEM47Q9BQJ4 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.44■□□□□ 0.38
TMEM47Q9BQJ4 MIR4525-201ENST00000580000 75 ntBASIC17.44■□□□□ 0.38
TMEM47Q9BQJ4 MIR4783-201ENST00000580343 82 ntBASIC17.44■□□□□ 0.38
TMEM47Q9BQJ4 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.44■□□□□ 0.38
TMEM47Q9BQJ4 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.44■□□□□ 0.38
TMEM47Q9BQJ4 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.44■□□□□ 0.38
TMEM47Q9BQJ4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM47Q9BQJ4 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM47Q9BQJ4 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM47Q9BQJ4 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.44■□□□□ 0.38
TMEM47Q9BQJ4 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM47Q9BQJ4 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.44■□□□□ 0.38
TMEM47Q9BQJ4 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.44■□□□□ 0.38
TMEM47Q9BQJ4 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM47Q9BQJ4 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TMEM47Q9BQJ4 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 AC018735.1-201ENST00000437208 1502 ntBASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 AC104306.2-201ENST00000451877 341 ntBASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 ZNF767P-206ENST00000513792 565 ntBASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 AL118558.3-201ENST00000607414 1079 ntBASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 AL136301.1-201ENST00000615830 422 ntBASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
TMEM47Q9BQJ4 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEM47Q9BQJ4 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM47Q9BQJ4 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM47Q9BQJ4 AC007292.2-201ENST00000593524 1812 ntBASIC17.42■□□□□ 0.38
TMEM47Q9BQJ4 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEM47Q9BQJ4 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TMEM47Q9BQJ4 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM47Q9BQJ4 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEM47Q9BQJ4 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM47Q9BQJ4 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM47Q9BQJ4 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM47Q9BQJ4 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.42■□□□□ 0.38
TMEM47Q9BQJ4 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM47Q9BQJ4 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM47Q9BQJ4 GCOM2-201ENST00000509133 1104 ntBASIC17.42■□□□□ 0.38
TMEM47Q9BQJ4 FAM8A2P-201ENST00000528813 1142 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms