Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 ATP6V0CP2-201ENST00000469409 207 ntBASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 NDUFV2P1-201ENST00000596415 907 ntBASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 AC022748.3-201ENST00000621828 275 ntBASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC85AQ96PX6 AC023090.2-201ENST00000625182 2110 ntBASIC18.65■□□□□ 0.58
CCDC85AQ96PX6 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC85AQ96PX6 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC85AQ96PX6 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC85AQ96PX6 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC85AQ96PX6 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC85AQ96PX6 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC85AQ96PX6 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCDC85AQ96PX6 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC85AQ96PX6 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCDC85AQ96PX6 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCDC85AQ96PX6 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC85AQ96PX6 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CCDC85AQ96PX6 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC85AQ96PX6 AC104073.2-201ENST00000453737 312 ntBASIC18.65■□□□□ 0.58
CCDC85AQ96PX6 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC85AQ96PX6 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC85AQ96PX6 EID1-202ENST00000560490 584 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC85AQ96PX6 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC85AQ96PX6 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC85AQ96PX6 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC85AQ96PX6 PPT1-215ENST00000641471 2368 ntBASIC18.65■□□□□ 0.58
CCDC85AQ96PX6 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC85AQ96PX6 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC85AQ96PX6 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC85AQ96PX6 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC85AQ96PX6 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC85AQ96PX6 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC85AQ96PX6 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC85AQ96PX6 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC85AQ96PX6 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC85AQ96PX6 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
CCDC85AQ96PX6 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC85AQ96PX6 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC85AQ96PX6 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC85AQ96PX6 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC85AQ96PX6 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.64■□□□□ 0.58
CCDC85AQ96PX6 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC85AQ96PX6 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
CCDC85AQ96PX6 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC85AQ96PX6 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC85AQ96PX6 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CCDC85AQ96PX6 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC85AQ96PX6 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC85AQ96PX6 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC85AQ96PX6 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC85AQ96PX6 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC85AQ96PX6 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC85AQ96PX6 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC85AQ96PX6 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC85AQ96PX6 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC85AQ96PX6 ARL16-210ENST00000574938 751 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC85AQ96PX6 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC85AQ96PX6 AC138649.2-201ENST00000615886 705 ntBASIC18.64■□□□□ 0.57
CCDC85AQ96PX6 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC85AQ96PX6 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC85AQ96PX6 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC85AQ96PX6 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC85AQ96PX6 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC85AQ96PX6 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC85AQ96PX6 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC85AQ96PX6 KRT8P29-201ENST00000420409 1371 ntBASIC18.64■□□□□ 0.57
CCDC85AQ96PX6 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CCDC85AQ96PX6 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC85AQ96PX6 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC85AQ96PX6 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC85AQ96PX6 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC85AQ96PX6 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC85AQ96PX6 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC85AQ96PX6 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC85AQ96PX6 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms