Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DDX11Q96FC9 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DDX11Q96FC9 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DDX11Q96FC9 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
DDX11Q96FC9 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
DDX11Q96FC9 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
DDX11Q96FC9 REXO1L4P-201ENST00000605109 1937 ntBASIC18■□□□□ 0.47
DDX11Q96FC9 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
DDX11Q96FC9 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DDX11Q96FC9 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DDX11Q96FC9 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.99■□□□□ 0.47
DDX11Q96FC9 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
DDX11Q96FC9 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX11Q96FC9 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.99■□□□□ 0.47
DDX11Q96FC9 AC139749.1-202ENST00000617529 3139 ntBASIC17.99■□□□□ 0.47
DDX11Q96FC9 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX11Q96FC9 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
DDX11Q96FC9 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
DDX11Q96FC9 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX11Q96FC9 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
DDX11Q96FC9 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
DDX11Q96FC9 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX11Q96FC9 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
DDX11Q96FC9 AC005229.1-201ENST00000392885 409 ntBASIC17.99■□□□□ 0.47
DDX11Q96FC9 AL355864.2-201ENST00000447420 863 ntBASIC17.99■□□□□ 0.47
DDX11Q96FC9 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.99■□□□□ 0.47
DDX11Q96FC9 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
DDX11Q96FC9 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.99■□□□□ 0.47
DDX11Q96FC9 AC009486.1-201ENST00000569860 813 ntBASIC17.99■□□□□ 0.47
DDX11Q96FC9 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.99■□□□□ 0.47
DDX11Q96FC9 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX11Q96FC9 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX11Q96FC9 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.99■□□□□ 0.47
DDX11Q96FC9 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX11Q96FC9 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.99■□□□□ 0.47
DDX11Q96FC9 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.99■□□□□ 0.47
DDX11Q96FC9 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
DDX11Q96FC9 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
DDX11Q96FC9 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
DDX11Q96FC9 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.99■□□□□ 0.47
DDX11Q96FC9 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
DDX11Q96FC9 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
DDX11Q96FC9 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX11Q96FC9 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX11Q96FC9 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX11Q96FC9 LINC00552-201ENST00000625151 2579 ntBASIC17.98■□□□□ 0.47
DDX11Q96FC9 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX11Q96FC9 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX11Q96FC9 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX11Q96FC9 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX11Q96FC9 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX11Q96FC9 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
DDX11Q96FC9 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.98■□□□□ 0.47
DDX11Q96FC9 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
DDX11Q96FC9 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
DDX11Q96FC9 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.98■□□□□ 0.47
DDX11Q96FC9 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.98■□□□□ 0.47
DDX11Q96FC9 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.98■□□□□ 0.47
DDX11Q96FC9 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX11Q96FC9 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.98■□□□□ 0.47
DDX11Q96FC9 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.98■□□□□ 0.47
DDX11Q96FC9 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.98■□□□□ 0.47
DDX11Q96FC9 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.98■□□□□ 0.47
DDX11Q96FC9 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
DDX11Q96FC9 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.98■□□□□ 0.47
DDX11Q96FC9 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.98■□□□□ 0.47
DDX11Q96FC9 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX11Q96FC9 LINC01101-201ENST00000622953 1884 ntBASIC17.98■□□□□ 0.47
DDX11Q96FC9 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DDX11Q96FC9 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX11Q96FC9 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
DDX11Q96FC9 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.98■□□□□ 0.47
DDX11Q96FC9 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX11Q96FC9 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX11Q96FC9 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX11Q96FC9 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DDX11Q96FC9 MYO15B-237ENST00000642007 4893 ntBASIC17.98■□□□□ 0.47
DDX11Q96FC9 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
DDX11Q96FC9 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.98■□□□□ 0.47
DDX11Q96FC9 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
DDX11Q96FC9 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DDX11Q96FC9 AC093525.8-201ENST00000624099 1342 ntBASIC17.98■□□□□ 0.47
DDX11Q96FC9 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX11Q96FC9 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
DDX11Q96FC9 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX11Q96FC9 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
DDX11Q96FC9 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX11Q96FC9 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX11Q96FC9 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
DDX11Q96FC9 AP001889.1-201ENST00000525414 633 ntBASIC17.97■□□□□ 0.47
DDX11Q96FC9 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX11Q96FC9 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.97■□□□□ 0.47
DDX11Q96FC9 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
DDX11Q96FC9 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX11Q96FC9 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
DDX11Q96FC9 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.97■□□□□ 0.47
DDX11Q96FC9 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
DDX11Q96FC9 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
DDX11Q96FC9 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX11Q96FC9 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms