Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM11Q96F44 AC026748.1-201ENST00000624349 3251 ntBASIC16.01■□□□□ 0.15
TRIM11Q96F44 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.01■□□□□ 0.15
TRIM11Q96F44 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM11Q96F44 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TRIM11Q96F44 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM11Q96F44 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM11Q96F44 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.01■□□□□ 0.15
TRIM11Q96F44 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.01■□□□□ 0.15
TRIM11Q96F44 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM11Q96F44 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TRIM11Q96F44 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM11Q96F44 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.01■□□□□ 0.15
TRIM11Q96F44 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM11Q96F44 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TRIM11Q96F44 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM11Q96F44 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM11Q96F44 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRIM11Q96F44 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM11Q96F44 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM11Q96F44 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM11Q96F44 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM11Q96F44 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRIM11Q96F44 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16■□□□□ 0.15
TRIM11Q96F44 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRIM11Q96F44 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM11Q96F44 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TRIM11Q96F44 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM11Q96F44 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRIM11Q96F44 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16■□□□□ 0.15
TRIM11Q96F44 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM11Q96F44 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM11Q96F44 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRIM11Q96F44 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16■□□□□ 0.15
TRIM11Q96F44 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16■□□□□ 0.15
TRIM11Q96F44 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TRIM11Q96F44 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRIM11Q96F44 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
TRIM11Q96F44 AC087499.6-201ENST00000411576 835 ntBASIC16■□□□□ 0.15
TRIM11Q96F44 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16■□□□□ 0.15
TRIM11Q96F44 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16■□□□□ 0.15
TRIM11Q96F44 SPTLC1P1-201ENST00000447199 261 ntBASIC16■□□□□ 0.15
TRIM11Q96F44 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16■□□□□ 0.15
TRIM11Q96F44 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16■□□□□ 0.15
TRIM11Q96F44 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16■□□□□ 0.15
TRIM11Q96F44 AC092552.1-201ENST00000547243 906 ntBASIC16■□□□□ 0.15
TRIM11Q96F44 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16■□□□□ 0.15
TRIM11Q96F44 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16■□□□□ 0.15
TRIM11Q96F44 SPDYE22P-201ENST00000582158 798 ntBASIC16■□□□□ 0.15
TRIM11Q96F44 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16■□□□□ 0.15
TRIM11Q96F44 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16■□□□□ 0.15
TRIM11Q96F44 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16■□□□□ 0.15
TRIM11Q96F44 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16■□□□□ 0.15
TRIM11Q96F44 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16■□□□□ 0.15
TRIM11Q96F44 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM11Q96F44 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TRIM11Q96F44 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRIM11Q96F44 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM11Q96F44 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRIM11Q96F44 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16■□□□□ 0.15
TRIM11Q96F44 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM11Q96F44 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TRIM11Q96F44 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM11Q96F44 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16■□□□□ 0.15
TRIM11Q96F44 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM11Q96F44 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM11Q96F44 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.99■□□□□ 0.15
TRIM11Q96F44 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
TRIM11Q96F44 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM11Q96F44 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM11Q96F44 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.99■□□□□ 0.15
TRIM11Q96F44 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
TRIM11Q96F44 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM11Q96F44 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM11Q96F44 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM11Q96F44 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM11Q96F44 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM11Q96F44 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM11Q96F44 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM11Q96F44 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.99■□□□□ 0.15
TRIM11Q96F44 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM11Q96F44 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.99■□□□□ 0.15
TRIM11Q96F44 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.99■□□□□ 0.15
TRIM11Q96F44 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.99■□□□□ 0.15
TRIM11Q96F44 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.99■□□□□ 0.15
TRIM11Q96F44 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.99■□□□□ 0.15
TRIM11Q96F44 AP001582.1-201ENST00000525856 295 ntBASIC15.99■□□□□ 0.15
TRIM11Q96F44 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.99■□□□□ 0.15
TRIM11Q96F44 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.99■□□□□ 0.15
TRIM11Q96F44 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.99■□□□□ 0.15
TRIM11Q96F44 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.99■□□□□ 0.15
TRIM11Q96F44 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.99■□□□□ 0.15
TRIM11Q96F44 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.99■□□□□ 0.15
TRIM11Q96F44 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.99■□□□□ 0.15
TRIM11Q96F44 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
TRIM11Q96F44 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM11Q96F44 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM11Q96F44 BX640514.1-201ENST00000583223 1918 ntBASIC15.99■□□□□ 0.15
TRIM11Q96F44 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM11Q96F44 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms