Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 BSG-215ENST00000618006 1329 ntTSL 2 BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 FUK-202ENST00000378912 3925 ntTSL 2 BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 DMBT1P1-203ENST00000636837 4628 ntBASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 AC211429.1-201ENST00000415277 523 ntBASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 HCG4B-203ENST00000450128 991 ntBASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 AC108751.1-201ENST00000490852 363 ntBASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 AF238378.1-201ENST00000526806 358 ntBASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 AC012640.2-201ENST00000561606 901 ntBASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 TCAP-202ENST00000578283 583 ntTSL 5 BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 AC025181.2-201ENST00000606994 802 ntBASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 TP73-AS1-207ENST00000624167 988 ntBASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 AC010507.1-201ENST00000633895 436 ntBASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 AP000550.4-202ENST00000639755 178 ntBASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 ABR-205ENST00000544583 5595 ntTSL 2 BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC11.87□□□□□ -0.51
MBD3L1Q8WWY6 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
MBD3L1Q8WWY6 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
MBD3L1Q8WWY6 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
MBD3L1Q8WWY6 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
MBD3L1Q8WWY6 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
MBD3L1Q8WWY6 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
MBD3L1Q8WWY6 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC11.86□□□□□ -0.51
MBD3L1Q8WWY6 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC11.86□□□□□ -0.51
MBD3L1Q8WWY6 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
MBD3L1Q8WWY6 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
MBD3L1Q8WWY6 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
MBD3L1Q8WWY6 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC11.86□□□□□ -0.51
MBD3L1Q8WWY6 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms