Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CT55Q8WUE5 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.96□□□□□ -0.17
CT55Q8WUE5 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CT55Q8WUE5 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CT55Q8WUE5 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CT55Q8WUE5 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CT55Q8WUE5 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CT55Q8WUE5 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.96□□□□□ -0.17
CT55Q8WUE5 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.18
CT55Q8WUE5 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CT55Q8WUE5 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
CT55Q8WUE5 SALL4P5-201ENST00000419001 1760 ntBASIC13.96□□□□□ -0.18
CT55Q8WUE5 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CT55Q8WUE5 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
CT55Q8WUE5 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC13.96□□□□□ -0.18
CT55Q8WUE5 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CT55Q8WUE5 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
CT55Q8WUE5 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CT55Q8WUE5 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CT55Q8WUE5 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CT55Q8WUE5 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CT55Q8WUE5 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
CT55Q8WUE5 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CT55Q8WUE5 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CT55Q8WUE5 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.95□□□□□ -0.18
CT55Q8WUE5 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CT55Q8WUE5 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CT55Q8WUE5 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CT55Q8WUE5 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CT55Q8WUE5 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CT55Q8WUE5 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.95□□□□□ -0.18
CT55Q8WUE5 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.95□□□□□ -0.18
CT55Q8WUE5 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CT55Q8WUE5 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CT55Q8WUE5 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CT55Q8WUE5 RN7SKP214-201ENST00000364208 315 ntBASIC13.95□□□□□ -0.18
CT55Q8WUE5 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CT55Q8WUE5 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC13.95□□□□□ -0.18
CT55Q8WUE5 VDAC1P1-201ENST00000439229 848 ntBASIC13.95□□□□□ -0.18
CT55Q8WUE5 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.95□□□□□ -0.18
CT55Q8WUE5 HLA-J-204ENST00000495278 958 ntBASIC13.95□□□□□ -0.18
CT55Q8WUE5 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CT55Q8WUE5 AC090857.1-201ENST00000527400 390 ntBASIC13.95□□□□□ -0.18
CT55Q8WUE5 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC13.95□□□□□ -0.18
CT55Q8WUE5 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CT55Q8WUE5 AC005962.1-201ENST00000584100 773 ntBASIC13.95□□□□□ -0.18
CT55Q8WUE5 AL133499.1-201ENST00000596207 608 ntBASIC13.95□□□□□ -0.18
CT55Q8WUE5 AL132994.2-201ENST00000603120 687 ntBASIC13.95□□□□□ -0.18
CT55Q8WUE5 AC079336.7-201ENST00000623428 1078 ntBASIC13.95□□□□□ -0.18
CT55Q8WUE5 AC023090.2-201ENST00000625182 2110 ntBASIC13.95□□□□□ -0.18
CT55Q8WUE5 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.95□□□□□ -0.18
CT55Q8WUE5 NAP1L6-202ENST00000641404 1222 ntBASIC13.95□□□□□ -0.18
CT55Q8WUE5 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CT55Q8WUE5 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.95□□□□□ -0.18
CT55Q8WUE5 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CT55Q8WUE5 MBLAC2-202ENST00000514906 1936 ntBASIC13.95□□□□□ -0.18
CT55Q8WUE5 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.95□□□□□ -0.18
CT55Q8WUE5 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CT55Q8WUE5 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CT55Q8WUE5 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CT55Q8WUE5 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CT55Q8WUE5 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CT55Q8WUE5 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CT55Q8WUE5 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CT55Q8WUE5 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.95□□□□□ -0.18
CT55Q8WUE5 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CT55Q8WUE5 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
CT55Q8WUE5 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CT55Q8WUE5 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CT55Q8WUE5 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.94□□□□□ -0.18
CT55Q8WUE5 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CT55Q8WUE5 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.94□□□□□ -0.18
CT55Q8WUE5 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CT55Q8WUE5 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
CT55Q8WUE5 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CT55Q8WUE5 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
CT55Q8WUE5 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CT55Q8WUE5 REXO1L2P-201ENST00000425429 2069 ntBASIC13.94□□□□□ -0.18
CT55Q8WUE5 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CT55Q8WUE5 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CT55Q8WUE5 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
CT55Q8WUE5 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CT55Q8WUE5 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CT55Q8WUE5 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC13.94□□□□□ -0.18
CT55Q8WUE5 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CT55Q8WUE5 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CT55Q8WUE5 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CT55Q8WUE5 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CT55Q8WUE5 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
CT55Q8WUE5 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CT55Q8WUE5 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC13.94□□□□□ -0.18
CT55Q8WUE5 ISCA2P1-201ENST00000425548 448 ntBASIC13.94□□□□□ -0.18
CT55Q8WUE5 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CT55Q8WUE5 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.94□□□□□ -0.18
CT55Q8WUE5 SCARNA21-201ENST00000517026 139 ntBASIC13.94□□□□□ -0.18
CT55Q8WUE5 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC13.94□□□□□ -0.18
CT55Q8WUE5 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
CT55Q8WUE5 AC009779.1-201ENST00000551138 283 ntBASIC13.94□□□□□ -0.18
CT55Q8WUE5 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC13.94□□□□□ -0.18
CT55Q8WUE5 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms