Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
RDH11Q8TC12 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
RDH11Q8TC12 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RDH11Q8TC12 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.9□□□□□ -0.02
RDH11Q8TC12 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RDH11Q8TC12 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RDH11Q8TC12 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.9□□□□□ -0.02
RDH11Q8TC12 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RDH11Q8TC12 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RDH11Q8TC12 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RDH11Q8TC12 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RDH11Q8TC12 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.9□□□□□ -0.02
RDH11Q8TC12 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RDH11Q8TC12 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.9□□□□□ -0.02
RDH11Q8TC12 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RDH11Q8TC12 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.9□□□□□ -0.02
RDH11Q8TC12 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RDH11Q8TC12 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RDH11Q8TC12 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
RDH11Q8TC12 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RDH11Q8TC12 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.9□□□□□ -0.02
RDH11Q8TC12 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.9□□□□□ -0.02
RDH11Q8TC12 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.9□□□□□ -0.02
RDH11Q8TC12 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.9□□□□□ -0.02
RDH11Q8TC12 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.9□□□□□ -0.02
RDH11Q8TC12 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.9□□□□□ -0.02
RDH11Q8TC12 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.9□□□□□ -0.02
RDH11Q8TC12 Z92544.3-201ENST00000624747 417 ntBASIC14.9□□□□□ -0.02
RDH11Q8TC12 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.9□□□□□ -0.02
RDH11Q8TC12 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.9□□□□□ -0.02
RDH11Q8TC12 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RDH11Q8TC12 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
RDH11Q8TC12 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RDH11Q8TC12 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RDH11Q8TC12 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RDH11Q8TC12 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.9□□□□□ -0.02
RDH11Q8TC12 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RDH11Q8TC12 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RDH11Q8TC12 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RDH11Q8TC12 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RDH11Q8TC12 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RDH11Q8TC12 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RDH11Q8TC12 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
RDH11Q8TC12 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RDH11Q8TC12 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
RDH11Q8TC12 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RDH11Q8TC12 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RDH11Q8TC12 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RDH11Q8TC12 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.9□□□□□ -0.02
RDH11Q8TC12 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RDH11Q8TC12 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RDH11Q8TC12 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.89□□□□□ -0.03
RDH11Q8TC12 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RDH11Q8TC12 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RDH11Q8TC12 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
RDH11Q8TC12 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RDH11Q8TC12 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.89□□□□□ -0.03
RDH11Q8TC12 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RDH11Q8TC12 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RDH11Q8TC12 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RDH11Q8TC12 AL158070.2-201ENST00000623713 1621 ntBASIC14.89□□□□□ -0.03
RDH11Q8TC12 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RDH11Q8TC12 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RDH11Q8TC12 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RDH11Q8TC12 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RDH11Q8TC12 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.89□□□□□ -0.03
RDH11Q8TC12 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RDH11Q8TC12 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RDH11Q8TC12 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
RDH11Q8TC12 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RDH11Q8TC12 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RDH11Q8TC12 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
RDH11Q8TC12 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RDH11Q8TC12 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
RDH11Q8TC12 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.89□□□□□ -0.03
RDH11Q8TC12 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
RDH11Q8TC12 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RDH11Q8TC12 AC114501.2-201ENST00000439631 535 ntBASIC14.89□□□□□ -0.03
RDH11Q8TC12 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.89□□□□□ -0.03
RDH11Q8TC12 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.89□□□□□ -0.03
RDH11Q8TC12 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RDH11Q8TC12 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RDH11Q8TC12 AC069120.2-201ENST00000524091 540 ntBASIC14.89□□□□□ -0.03
RDH11Q8TC12 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.89□□□□□ -0.03
RDH11Q8TC12 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.89□□□□□ -0.03
RDH11Q8TC12 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.89□□□□□ -0.03
RDH11Q8TC12 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RDH11Q8TC12 AC027796.2-201ENST00000575326 344 ntBASIC14.89□□□□□ -0.03
RDH11Q8TC12 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.89□□□□□ -0.03
RDH11Q8TC12 AL844908.2-201ENST00000609461 460 ntBASIC14.89□□□□□ -0.03
RDH11Q8TC12 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.89□□□□□ -0.03
RDH11Q8TC12 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RDH11Q8TC12 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RDH11Q8TC12 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.89□□□□□ -0.03
RDH11Q8TC12 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RDH11Q8TC12 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RDH11Q8TC12 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RDH11Q8TC12 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.89□□□□□ -0.03
RDH11Q8TC12 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RDH11Q8TC12 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms