Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
C3orf56Q8N813 MARK2P5-201ENST00000507649 634 ntBASIC11.87□□□□□ -0.51
C3orf56Q8N813 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
C3orf56Q8N813 NEU3-205ENST00000531619 582 ntTSL 5 BASIC11.87□□□□□ -0.51
C3orf56Q8N813 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC11.87□□□□□ -0.51
C3orf56Q8N813 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC11.87□□□□□ -0.51
C3orf56Q8N813 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC11.87□□□□□ -0.51
C3orf56Q8N813 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
C3orf56Q8N813 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC11.87□□□□□ -0.51
C3orf56Q8N813 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC11.87□□□□□ -0.51
C3orf56Q8N813 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
C3orf56Q8N813 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
C3orf56Q8N813 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
C3orf56Q8N813 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
C3orf56Q8N813 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
C3orf56Q8N813 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
C3orf56Q8N813 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
C3orf56Q8N813 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC11.87□□□□□ -0.51
C3orf56Q8N813 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
C3orf56Q8N813 NORAD-201ENST00000565493 5339 ntBASIC11.87□□□□□ -0.51
C3orf56Q8N813 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
C3orf56Q8N813 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
C3orf56Q8N813 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC11.87□□□□□ -0.51
C3orf56Q8N813 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC11.87□□□□□ -0.51
C3orf56Q8N813 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
C3orf56Q8N813 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
C3orf56Q8N813 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC11.87□□□□□ -0.51
C3orf56Q8N813 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
C3orf56Q8N813 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
C3orf56Q8N813 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC11.87□□□□□ -0.51
C3orf56Q8N813 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
C3orf56Q8N813 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
C3orf56Q8N813 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC11.87□□□□□ -0.51
C3orf56Q8N813 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
C3orf56Q8N813 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
C3orf56Q8N813 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC11.87□□□□□ -0.51
C3orf56Q8N813 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
C3orf56Q8N813 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
C3orf56Q8N813 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC11.87□□□□□ -0.51
C3orf56Q8N813 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
C3orf56Q8N813 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
C3orf56Q8N813 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
C3orf56Q8N813 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC11.87□□□□□ -0.51
C3orf56Q8N813 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
C3orf56Q8N813 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
C3orf56Q8N813 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
C3orf56Q8N813 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC11.86□□□□□ -0.51
C3orf56Q8N813 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC11.86□□□□□ -0.51
C3orf56Q8N813 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
C3orf56Q8N813 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
C3orf56Q8N813 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
C3orf56Q8N813 PCDHB19P-201ENST00000570871 2371 ntBASIC11.86□□□□□ -0.51
C3orf56Q8N813 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
C3orf56Q8N813 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC11.86□□□□□ -0.51
C3orf56Q8N813 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC11.86□□□□□ -0.51
C3orf56Q8N813 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
C3orf56Q8N813 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC11.86□□□□□ -0.51
C3orf56Q8N813 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC11.86□□□□□ -0.51
C3orf56Q8N813 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
C3orf56Q8N813 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC11.86□□□□□ -0.51
C3orf56Q8N813 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
C3orf56Q8N813 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC11.86□□□□□ -0.51
C3orf56Q8N813 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
C3orf56Q8N813 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC11.86□□□□□ -0.51
C3orf56Q8N813 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
C3orf56Q8N813 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
C3orf56Q8N813 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
C3orf56Q8N813 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC11.86□□□□□ -0.51
C3orf56Q8N813 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
C3orf56Q8N813 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
C3orf56Q8N813 AP002414.2-201ENST00000591780 3365 ntBASIC11.86□□□□□ -0.51
C3orf56Q8N813 DBET-201ENST00000630918 3363 ntBASIC11.86□□□□□ -0.51
C3orf56Q8N813 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
C3orf56Q8N813 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
C3orf56Q8N813 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
C3orf56Q8N813 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
C3orf56Q8N813 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
C3orf56Q8N813 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
C3orf56Q8N813 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
C3orf56Q8N813 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
C3orf56Q8N813 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
C3orf56Q8N813 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
C3orf56Q8N813 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
C3orf56Q8N813 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC11.86□□□□□ -0.51
C3orf56Q8N813 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
C3orf56Q8N813 RN7SKP214-201ENST00000364208 315 ntBASIC11.86□□□□□ -0.51
C3orf56Q8N813 NPPA-201ENST00000376476 728 ntTSL 3 BASIC11.86□□□□□ -0.51
C3orf56Q8N813 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
C3orf56Q8N813 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
C3orf56Q8N813 B9D1-203ENST00000395615 805 ntTSL 3 BASIC11.86□□□□□ -0.51
C3orf56Q8N813 HNRNPA1P41-201ENST00000397777 928 ntBASIC11.86□□□□□ -0.51
C3orf56Q8N813 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC11.86□□□□□ -0.51
C3orf56Q8N813 AC078991.1-201ENST00000437297 610 ntBASIC11.86□□□□□ -0.51
C3orf56Q8N813 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC11.86□□□□□ -0.51
C3orf56Q8N813 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
C3orf56Q8N813 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
C3orf56Q8N813 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
C3orf56Q8N813 CSH2-206ENST00000560142 749 ntTSL 5 BASIC11.86□□□□□ -0.51
C3orf56Q8N813 AC100827.2-201ENST00000563214 1194 ntBASIC11.86□□□□□ -0.51
C3orf56Q8N813 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms