Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
NPAS4Q8IUM7 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16■□□□□ 0.15
NPAS4Q8IUM7 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NPAS4Q8IUM7 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16■□□□□ 0.15
NPAS4Q8IUM7 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NPAS4Q8IUM7 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC16■□□□□ 0.15
NPAS4Q8IUM7 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
NPAS4Q8IUM7 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
NPAS4Q8IUM7 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16■□□□□ 0.15
NPAS4Q8IUM7 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16■□□□□ 0.15
NPAS4Q8IUM7 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16■□□□□ 0.15
NPAS4Q8IUM7 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
NPAS4Q8IUM7 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
NPAS4Q8IUM7 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NPAS4Q8IUM7 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NPAS4Q8IUM7 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NPAS4Q8IUM7 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NPAS4Q8IUM7 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NPAS4Q8IUM7 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16■□□□□ 0.15
NPAS4Q8IUM7 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC16■□□□□ 0.15
NPAS4Q8IUM7 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
NPAS4Q8IUM7 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC16■□□□□ 0.15
NPAS4Q8IUM7 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC16■□□□□ 0.15
NPAS4Q8IUM7 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16■□□□□ 0.15
NPAS4Q8IUM7 AL645933.1-201ENST00000440087 609 ntBASIC16■□□□□ 0.15
NPAS4Q8IUM7 AC098935.1-201ENST00000446057 611 ntBASIC16■□□□□ 0.15
NPAS4Q8IUM7 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16■□□□□ 0.15
NPAS4Q8IUM7 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16■□□□□ 0.15
NPAS4Q8IUM7 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16■□□□□ 0.15
NPAS4Q8IUM7 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16■□□□□ 0.15
NPAS4Q8IUM7 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16■□□□□ 0.15
NPAS4Q8IUM7 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16■□□□□ 0.15
NPAS4Q8IUM7 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
NPAS4Q8IUM7 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC16■□□□□ 0.15
NPAS4Q8IUM7 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16■□□□□ 0.15
NPAS4Q8IUM7 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC16■□□□□ 0.15
NPAS4Q8IUM7 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NPAS4Q8IUM7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
NPAS4Q8IUM7 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16■□□□□ 0.15
NPAS4Q8IUM7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16■□□□□ 0.15
NPAS4Q8IUM7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16■□□□□ 0.15
NPAS4Q8IUM7 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NPAS4Q8IUM7 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NPAS4Q8IUM7 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
NPAS4Q8IUM7 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16■□□□□ 0.15
NPAS4Q8IUM7 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NPAS4Q8IUM7 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 AC144522.1-201ENST00000625111 1658 ntBASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 AC104784.1-201ENST00000473096 294 ntBASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 RN7SL555P-201ENST00000584742 339 ntBASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.99■□□□□ 0.15
NPAS4Q8IUM7 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 AC023024.2-201ENST00000623561 1993 ntBASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 C18orf15-201ENST00000623680 2534 ntBASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms