Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CCDC25Q86WR0 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC25Q86WR0 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC25Q86WR0 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC25Q86WR0 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC25Q86WR0 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CCDC25Q86WR0 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CCDC25Q86WR0 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CCDC25Q86WR0 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC25Q86WR0 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC25Q86WR0 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 CEND1P1-201ENST00000451006 455 ntBASIC15.68■□□□□ 0.1
CCDC25Q86WR0 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC25Q86WR0 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 MKNK2P1-201ENST00000437526 628 ntBASIC15.67■□□□□ 0.1
CCDC25Q86WR0 RBPMS2P1-201ENST00000437762 623 ntBASIC15.67■□□□□ 0.1
CCDC25Q86WR0 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 AC105339.1-204ENST00000636249 355 ntBASIC15.67■□□□□ 0.1
CCDC25Q86WR0 AF228730.6-201ENST00000641497 218 ntBASIC15.67■□□□□ 0.1
CCDC25Q86WR0 AC084121.3-201ENST00000641716 218 ntBASIC15.67■□□□□ 0.1
CCDC25Q86WR0 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms